DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and slc2a1

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001072458.1 Gene:slc2a1 / 779913 XenbaseID:XB-GENE-5755357 Length:492 Species:Xenopus tropicalis


Alignment Length:483 Identity:135/483 - (27%)
Similarity:235/483 - (48%) Gaps:71/483 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QVLAALSVSLCSLVVG-------------------------FVSAYTSPALVSMTDRTITSFEVT 67
            ::.|.|.:::|:.|:|                         ::..|..|    :.:.|:||....
 Frog     6 KMTARLMLAVCTAVIGSLQFGYNTGVINAPQEVIEGFYNATWLERYNEP----IPESTLTSLWSL 66

  Fly    68 KDAGSWVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIA---CAVNVIMILCGR 129
            ..|...|||      :.|..:.|..:...|||:::|...|...::::|:.   .||:..|::.||
 Frog    67 SVAIFSVGG------MVGSFSVGLFVNRFGRRNSMLMANVLAFLAAILMGFSKLAVSFEMLIIGR 125

  Fly   130 FLTGFCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAG---SFMNWSMLAFLGA 191
            |:.|...|:.:..:|:|:||.....:||.||.|......:|||:..:.|   ...|.|:..||..
 Frog   126 FVVGLYCGLTTGFVPMYVGEVSPTSLRGALGTLHQLGVVVGILIAQIFGLKPIMGNDSLWPFLLG 190

  Fly   192 ALPVPFLILMIII---PETPRW-FVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQA 252
            .:.:|.::..|::   ||:||: .:||.:|::|:..||.||| ..||..:|:|:.:......|: 
 Frog   191 CIFIPAILQCIMLPFCPESPRFLLINRNEEDKAKSVLKKLRG-TTDVSSDLQEMKEESRQMMRE- 253

  Fly   253 TQNTCLELFKRNNL--KPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNL-STIIVGVV 314
            .:.|.|||| |:.|  :|:.|::.|...||.||||||.:|:..||:.|  .::..: :||..|:|
 Frog   254 KKVTILELF-RSPLYRQPMFIAIILQLSQQLSGINAVFYYSTMIFQKA--QVEQPVYATIGAGIV 315

  Fly   315 NFFATFMGIILIDRLGRKIL-------LYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLTC 372
            |...|.:.:.:::|.||:.|       :.|..|.|.:.|::|          ..|..:.:|.:..
 Frog   316 NTAFTVVSLFVVERAGRRTLHLIGLGGMAVCAILMTIALALL----------DSVGGMSYLSIVA 370

  Fly   373 FVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFW 437
            ...::..|.:|.|||||.::.|:.....|..|.:|....||...|:|...||.:....||: .|.
 Frog   371 IFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAIAVAGLSNWTSNFIVGMGFQYVEQLCGAY-VFI 434

  Fly   438 LFGAICIVGLFFVIIFVPETRGKSLEEI 465
            :|..:.::...|....||||:|::.:||
 Frog   435 IFTVLLLIFFVFTYFKVPETKGRTFDEI 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 135/480 (28%)
MFS 33..454 CDD:119392 127/465 (27%)
slc2a1NP_001072458.1 MFS_GLUT_Class1 13..457 CDD:340989 130/469 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.