DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and slc2a13b

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:XP_005163236.1 Gene:slc2a13b / 559440 ZFINID:ZDB-GENE-090812-1 Length:641 Species:Danio rerio


Alignment Length:541 Identity:139/541 - (25%)
Similarity:225/541 - (41%) Gaps:116/541 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FSQVLAALSVSLCSLVVGFVSAYTSPALV---------SMTDRTITSFEVTKDAGSWVGGIMPLA 81
            |...||..| :|...:.|:.:...|.|::         |:....:.|..|         |...::
Zfish    34 FVYTLAFFS-ALGGFLFGYDTGVVSGAMLLLKREKKLSSVWQELLVSITV---------GAAAVS 88

  Fly    82 ALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVY 146
            |||||...|    ..|||..||..:..|....::::.|.|...:||||...|..:||||:::|||
Zfish    89 ALAGGFLNG----RFGRRVCILLASFIFCAGGIILSVARNKEALLCGRLTVGLGLGIASMTVPVY 149

  Fly   147 LGETLQPEVRGTLGLLPTALGNIG-ILVCYVAGSFM-----NWSMLAFLGAALPVPFLIL-MIII 204
            :.|...|::||.|..:.|.....| .:...|.|:|.     .|..:..| :.:|.....| .:.:
Zfish   150 IAEVSPPDLRGQLVTVNTLFITGGQFIASVVDGAFSYLPHDGWRFMLGL-SVVPAALQFLGFLFL 213

  Fly   205 PETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTCL--ELFKRNNLK 267
            ||:|||.:.:|..:.|...|:.:|| :.|||.|.:.:..|..:..|.......|  .|......:
Zfish   214 PESPRWLLQKGFTQNALLVLRQIRG-DVDVEEEFESIRCSIQEEQRDVAGGPVLWRMLASPPARR 277

  Fly   268 PLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGV--VNFFATFMGIILIDRLG 330
            .|.:..||..|||.:|||.|::|:..|.:.:|...|.....:..|.  .||..|.:|:.|::|:|
Zfish   278 ALIVGCGLQMFQQLAGINTVMYYSATILQMSGVQDDQMAIWLAAGTAFTNFLFTLVGVWLVERVG 342

  Fly   331 RKILLYVSDIAMIVTLSIL----------------------------GGFFYCKA---------- 357
            |:.|...|.:...|:|.:|                            |.:.:|::          
Zfish   343 RRRLTMASLLGTAVSLMVLAAGFLLSAQASPPVTFHPSNPSIHNSTCGNYGFCESCMLDPDCGFC 407

  Fly   358 HG------------------PDVSHLG------------------------WLPLTCFVIYILGF 380
            :|                  .:.:.||                        |:.|...::|:..|
Zfish   408 YGLNATAVVQSSCVPVDPANTETAALGRCFNGTQKASSVFWAYNYCPTPYSWVVLLGLILYLAFF 472

  Fly   381 SLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIV 445
            :.|.||:||.:..||.|...|....:.....||.|..:|:.||..:...:..:|||:|:.|:.::
Zfish   473 APGMGPMPWTVNSEIYPLWARSTGNACSAGVNWICNVLVSLTFLHVAQYLTYYGAFFLYAALALL 537

  Fly   446 GLFFVIIFVPETRGKSLEEIE 466
            |..||...:|||:|..|||||
Zfish   538 GFVFVSGCLPETKGLRLEEIE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 137/536 (26%)
MFS 33..454 CDD:119392 127/520 (24%)
slc2a13bXP_005163236.1 Sugar_tr 38..561 CDD:278511 138/537 (26%)
MFS 40..542 CDD:119392 125/517 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577027
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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