DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and slc2a2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001011453.1 Gene:slc2a2 / 496943 XenbaseID:XB-GENE-486462 Length:495 Species:Xenopus tropicalis


Alignment Length:495 Identity:137/495 - (27%)
Similarity:233/495 - (47%) Gaps:57/495 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NFTFSQVLAALSVSLCSLVVGF-VSAYTSPALV--------------SMTDRTITSFEVTKDAGS 72
            |.|.:.|.|..:..|.||..|: :....:|..:              :.||.|.....| |...|
 Frog     6 NLTGTLVFAVFTAVLASLQFGYGIGVINAPQKIIENHYTRVLLEGSENQTDTTPVQSSV-KMYWS 69

  Fly    73 WVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACA---VNVIMILCGRFLTGF 134
            ....:..|..:......|.:.:.|||...::...:..::.:||:..|   ....:::.||.:||.
 Frog    70 LSVSVFSLGGMVSSFFVGWIADKLGRIKAMMVVNILAVIGALLMGLAPLGQAHALVIAGRLITGL 134

  Fly   135 CVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVC------YVAGSFMNWSMLAFLGAAL 193
            ..|:||..:|:|:||.....:||.||.|.......|||:.      ::.||...|.:|..|....
 Frog   135 YCGLASGLVPMYVGEISPTALRGALGTLHQLAIVTGILISQVVGLEFILGSEHLWPVLLGLSGVP 199

  Fly   194 PVPFLILMIIIPETPRW-FVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTC 257
            .|...||:...||:||: .:..|:.|.|::.|..||| |.|...:::|:.:.:.:|:.: .:.:.
 Frog   200 AVVQTILLFFCPESPRFLLIKLGKTEAAKRNLIKLRG-EYDPTKDIEEMKKEKEEAESE-KKVSI 262

  Fly   258 LELFKRNNLK-PLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFM 321
            ::|||.:|.: ||.:||.|...|||||||.:.:|:..||..||.: ....:||.||.||...|.:
 Frog   263 IQLFKSSNYRQPLVVSLVLHISQQFSGINGIFYYSTSIFTRAGIS-QPVYATIGVGAVNTVFTVV 326

  Fly   322 GIILIDRLGRKIL-------LYVSDIAMIVTLSILGGFFYCKAHGPDVSH--LGWLPLTCFVIYI 377
            .:.|:::.||:.|       :.:..|.|.:.|::|            ..|  :.:|.|....:::
 Frog   327 SVFLVEKAGRRSLYLVGLGGMCICAIVMTIALALL------------TQHAWMSYLSLVAIFLFV 379

  Fly   378 LGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAI 442
            :.|.:|.|||||.::.|:.....|..|.:|....||.|.|::...|:.:..|.|.: .|.:|..:
 Frog   380 VFFEVGPGPIPWFIVAELFSQGPRPAAMAVSGCCNWTCNFIIGMCFEYIADACGPY-IFIIFAVL 443

  Fly   443 CIVGLFFVIIFVPETRGKSLEEI-----ERKMMGRVPMSS 477
            .::...|....||||:|||.:||     ::|:..|..:.|
 Frog   444 LLIFTVFTYFKVPETKGKSFDEIAAEFRKKKLSTRKGLKS 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 131/475 (28%)
MFS 33..454 CDD:119392 121/455 (27%)
slc2a2NP_001011453.1 Sugar_tr 14..470 CDD:278511 131/472 (28%)
MFS 69..453 CDD:119392 111/399 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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