DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and CG1208

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster


Alignment Length:463 Identity:164/463 - (35%)
Similarity:252/463 - (54%) Gaps:23/463 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSF-----------------EVTKDAGSWVG 75
            |.:||:.:.|.::..|...::|||....::....:||                 .:|....:.||
  Fly    45 QYVAAMIICLGAVAAGTALSWTSPVFPQISAGNESSFNSTTGGISNSTSNENDIRLTDSQKTLVG 109

  Fly    76 GIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIAS 140
            .::|..||.|.:..|.:.:.:|||.|.:...:|||::.:.::.|.:|..:..||||.|...|...
  Fly   110 SMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFC 174

  Fly   141 LSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSFMNWSMLAFLGAALPVPFLILMIIIP 205
            :..|:|:.|..:..:||:||.|...|..||||..||.|:.::|..|:.|...:|:..|:.:.|:|
  Fly   175 VVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVSWKTLSLLCLIIPILLLVGLFIVP 239

  Fly   206 ETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTCLELF-KRNNLKPL 269
            |||.:.:..|:...|.:|||||.|...:....::.:   |.|.|:.....:..:|| .|.:...:
  Fly   240 ETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAI---QNDLDQTGVDASVKDLFSNRASRNGM 301

  Fly   270 SISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFMGIILIDRLGRKIL 334
            .||:.||.||||||||||||:..:|| ::.||::.|:.||:||||....|....:||::.|||||
  Fly   302 VISVLLMVFQQFSGINAVIFFMNEIF-ESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKIL 365

  Fly   335 LYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAK 399
            |..|...|.|.|::||.:.....|......:|||||.|.|::|:.||:|:|||||:||||:....
  Fly   366 LIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPD 430

  Fly   400 IRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFVPETRGKSLEE 464
            ::|.|.|:....||.|..:||..|..|. |.||...||.|.|...|...:|.|.:.||:|||..:
  Fly   431 VKGIAVSLSVMMNWVCVSLVTWLFGVLN-AGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQ 494

  Fly   465 IERKMMGR 472
            |:..:.||
  Fly   495 IQSWLSGR 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 161/453 (36%)
MFS 33..454 CDD:119392 153/438 (35%)
CG1208NP_001097692.1 MFS 96..482 CDD:119392 145/390 (37%)
MFS_1 96..443 CDD:284993 129/350 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444583
Domainoid 1 1.000 212 1.000 Domainoid score I87
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 217 1.000 Inparanoid score I143
Isobase 1 0.950 - 0 Normalized mean entropy S2521
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm9751
orthoMCL 1 0.900 - - OOG6_100060
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
1110.750

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