DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and CG8249

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster


Alignment Length:496 Identity:140/496 - (28%)
Similarity:244/496 - (49%) Gaps:37/496 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGSWVGGIMPL 80
            |..|.:......||:|.:..::.....|...|..:..|..:.| |.....:.....||...:..|
  Fly    33 PPPGEQTRAVRRQVIAVILANVGVFSTGMTLAMPTATLHQLKD-TTEPVHLNDSQASWFASVNAL 96

  Fly    81 AALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACA----VNVI--MILCGRFLTGFCVGIA 139
            :|..||:..|.|::.:||:.:::...|..|::.:|:|..    .|..  .::..||:.|..:|:|
  Fly    97 SAPIGGLLSGFLLDRIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQLIVSRFMLGVGMGLA 161

  Fly   140 SLSLPVYLGETLQPEVRGTLGLLPTALGNI-GILVCYVAGSFM--NWSMLAFLGAALPVPFLILM 201
            |....||..|...|:.||:| :|.|::... ||.:.|..|..:  ::.::|.:.....:..|:.:
  Fly   162 SAPPGVYAAEISVPKTRGSL-ILGTSISVAGGITILYGIGYCIRDDFRLIALICCGYQLVALLCV 225

  Fly   202 IIIPETPRWFVNRGQEERARKALKWLRG-KEAD--VEPELKELMQSQADADRQATQNTCL-ELFK 262
            :.:||:..|.:::.:...|:::|.:.|| .::|  ..|::.|..|....:.:|  :||.: |.|.
  Fly   226 LPLPESHCWLLSKKRVTEAKRSLNYFRGFNKSDEITHPQVLEEFQLLQKSLQQ--RNTAVKESFW 288

  Fly   263 RN-----NLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATF-M 321
            ||     ..|||.|.:.|..|||.:||..||.:.|||.::||..||..:..:::|:.....|. |
  Fly   289 RNLHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPFMCAVLIGLARLITTCPM 353

  Fly   322 GIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLTCFVIYILGFSLGFGP 386
            |.|| :..||:....:|.:.|.|.:.:|.|....:.    :..:.:||:...|.:|:..:||...
  Fly   354 GYIL-EWWGRRRAGIISTLGMSVCMFLLAGHSQIEI----LKEVPYLPVVAIVGFIVLSTLGLYT 413

  Fly   387 IPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVI 451
            :|:.|:.|:.|.|:||||:.:..|...|.:|||.||:..:...:|....|.:||.:.:..|.||.
  Fly   414 LPFFMISELFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFGVMALFALIFVY 478

  Fly   452 IFVPETRGKSLEEIERKM-MGR--------VPMSSVVNIKP 483
            :.:||||.::|.|||.:. .||        |.|..|...||
  Fly   479 LALPETRRRTLLEIEEQFRSGRSKSQNQADVEMKEVFVRKP 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 128/454 (28%)
MFS 33..454 CDD:119392 120/439 (27%)
CG8249NP_001246349.1 MFS 49..479 CDD:119392 120/438 (27%)
Sugar_tr 60..496 CDD:278511 128/444 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444593
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2521
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
76.800

Return to query results.
Submit another query.