DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and Slc2a10

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001102433.1 Gene:Slc2a10 / 366251 RGDID:1306552 Length:536 Species:Rattus norvegicus


Alignment Length:543 Identity:149/543 - (27%)
Similarity:228/543 - (41%) Gaps:128/543 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LKANFTFSQVLAALSVSLCSLVVGF-VSAYTSPALVSMTDRTITSFEVTKDAGSWVGGIMPLAAL 83
            |....||...||.:|.:|..|.:.| :|......||                     |.:.|.|.
  Rat    16 LLGGLTFGYELAVISGALLPLQLDFRLSCLEQELLV---------------------GSLLLGAF 59

  Fly    84 AGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLG 148
            ...:.||.||:..|||..||.:.|..:..||::..|.::..:|.||...||.:.::|::..:|:.
  Rat    60 LASLVGGFLIDCYGRRRAILGSNVVLLAGSLILGLAGSLPWLLLGRSSVGFAISLSSMACCIYVS 124

  Fly   149 ETLQPEVRGTLGLLPTALGNIGILVCY-----VAGSFMNWSMLAFLGAALPVPFLILMIIIPETP 208
            |.:.|..||.|..|......:|||..|     :|||...|..: |..||.|.       ::....
  Rat   125 ELVGPRQRGVLVSLYEVGITVGILFSYGLNYVLAGSPWGWRHM-FGWAAAPA-------LLQSLS 181

  Fly   209 RWFVNRGQE-ERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTCLELFKRNN--LKPLS 270
            .:|:..|.| ..||:.|..|:|.|......:|             .|.|.|:||:..:  .....
  Rat   182 LFFLPAGAEGTAARQDLIPLQGGETSKLGLVK-------------AQYTFLDLFRAQDGMWSRTV 233

  Fly   271 ISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSN--LSTIIVGVVNFFATFMGIILIDRLGRKI 333
            :.|||:.|||.:|...|::|...||:..|....|:  |:::.:|.|...||.:...|:||:||:.
  Rat   234 VGLGLVLFQQLTGQPNVLYYASTIFRSVGFHGGSSAVLASVGLGTVKVVATLIATGLVDRVGRRA 298

  Fly   334 LLYVSDIAMIVTLSILGGFFY---------CKAHG--------------------PDVSH----- 364
            ||......|.:::|.:|...:         |.|..                    |.|.|     
  Rat   299 LLLSGCALMALSVSGIGLVSFAVSLDSGPSCLATSNTSQQVDLPQTPGLLVRTSLPPVLHTSGDQ 363

  Fly   365 ----------------------------------------LGWLPLTCFVIYILGFSLGFGPIPW 389
                                                    |.|..|.|.::|:..||.||||:.|
  Rat   364 GQPVRSVTERPIHPVITASLGPALNIDSSVPTSPIPEHTLLCWSALVCMMVYVSAFSFGFGPVTW 428

  Fly   390 LMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFV 454
            |::.||.|.:|||.|.:..::|||.....::.:|.||..|:|....|.|:|...::||.|:.:.|
  Rat   429 LVLSEIYPVEIRGRAFAFCSSFNWAANLFISLSFLDLIGAIGLAWTFLLYGLTAVLGLAFIYLLV 493

  Fly   455 PETRGKSLEEIERK-MMGRVPMS 476
            |||:|:||.|||:: .|.|.|:|
  Rat   494 PETKGQSLAEIEQQFQMRRFPLS 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 140/520 (27%)
MFS 33..454 CDD:119392 130/505 (26%)
Slc2a10NP_001102433.1 Sugar_tr 11..508 CDD:278511 145/533 (27%)
MFS 14..>330 CDD:119392 96/355 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337906
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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