DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and itr1

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_593858.2 Gene:itr1 / 2543145 PomBaseID:SPAC4F8.15 Length:575 Species:Schizosaccharomyces pombe


Alignment Length:487 Identity:130/487 - (26%)
Similarity:232/487 - (47%) Gaps:34/487 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RADTHVSFSVP---ADGLKANFTFSQV-LAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEV 66
            |:::::|.|.|   .|.::.......| :.|.:..:..|:.|:.:...|.||| :...::...|:
pombe    61 RSNSNISLSEPHALNDTVEDQPVSKWVWVLAFAAGIGGLLFGYDTGVISGALV-VIGTSLGGHEL 124

  Fly    67 TKDAGSWVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFL 131
            |.....::.....|.||.|||..|.|.::.||:..|...::..||.|::...|.::..::.|||:
pombe   125 TNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFV 189

  Fly   132 TGFCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCY-VAGSFMN----WSMLAFLGA 191
            .|:.||||||.:|:||.|....::||.|.::...|...|.::.| :..:|.:    |..:..| |
pombe   190 IGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAYGIDTAFEHVHNGWRWMVGL-A 253

  Fly   192 ALPVPF-LILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEP-ELKELMQSQADADR---- 250
            .:|..| |.::|.:||:||..|   ::||:::|...|........| |:|..:....:..|    
pombe   254 MVPAAFQLFILIWLPESPRLLV---KKERSQEAYNTLARIYPTAHPYEIKTKLYLIQEGVRDPFS 315

  Fly   251 ----QATQNTCLEL-FKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTII 310
                |....|..|| |..:|.:.|.::.||...||.||.|::::::..||:..|.. :...:.:|
pombe   316 GSRWQKIVKTFKELYFNPSNFRALILACGLQAMQQLSGFNSLMYFSSTIFEVVGFN-NPTATGLI 379

  Fly   311 VGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHL-----GW--L 368
            :...||..|.:...:||..||:|||.::...||..|.:....|:......:.::.     .|  :
pombe   380 IAATNFVFTIVAFGVIDFFGRRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYTSGQSNAWAIV 444

  Fly   369 PLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAH 433
            .|...::|:..::.|.|.:|| ...|:.|..:||....:.||.||.....:..:|..|...:...
pombe   445 VLISMIVYVASYASGLGNLPW-QQSELFPMSVRGLGTGMSTAVNWAGNLGIGASFLTLMSEITPT 508

  Fly   434 GAFWLFGAICIVGLFFVIIFVPETRGKSLEEI 465
            |.|.|:|.:|.:|....:...|:....::|||
pombe   509 GTFALYGGLCFLGWLGALFCYPDLTDYTIEEI 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 124/458 (27%)
MFS 33..454 CDD:119392 119/443 (27%)
itr1NP_593858.2 Sugar_tr 90..544 CDD:278511 124/458 (27%)
MFS 92..529 CDD:119392 119/443 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I819
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 184 1.000 Inparanoid score I1095
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13833
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.860

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