DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and SPBC16A3.17c

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_596772.1 Gene:SPBC16A3.17c / 2539979 PomBaseID:SPBC16A3.17c Length:599 Species:Schizosaccharomyces pombe


Alignment Length:567 Identity:118/567 - (20%)
Similarity:198/567 - (34%) Gaps:192/567 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DTHVSFSVPADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGS 72
            ||::.. :|.:.:|.      |:.||.::|      |::|..:..:.:........|..| .:.|
pombe    84 DTNIQL-IPENNMKI------VVPALILTL------FLAALDNTIVTTALPTIAEDFNDT-SSSS 134

  Fly    73 WVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGF-CV 136
            |:|....||:.|.....|.....|||:..:......|::.|.|...:.|:|.::..|.:.|. ..
pombe   135 WIGSAYVLASNAVLPAVGVFCNILGRKIVLYICIFFFMLGSALCGASQNMIWLIVCRAIQGLGGG 199

  Fly   137 GIASL------------SLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSFM-------- 181
            ||.||            :.|:|            .|:|.||.|     ...|||..:        
pombe   200 GIISLVNIIISDITPLRTRPMY------------SGILATAWG-----AALVAGPIIGGAICQRT 247

  Fly   182 NWSMLAF-------LGAALPVPFL----------------------------ILMIIIPETPRWF 211
            .|..:.|       :..||.|.||                            |::|::.      
pombe   248 TWRWIFFINLPSGGIATALIVVFLHLLPCERTSFKKFLKTFDFIGLVCVITGIVLILLG------ 306

  Fly   212 VNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTCLELF--------KRNNLKP 268
            ::.|....     ||.|                 |:.........||.:|        |||.:.|
pombe   307 ISLGASSG-----KWRR-----------------ANILCYLIIGGCLFVFAFIYDTFTKRNAVLP 349

  Fly   269 LSI-----SLGLMFFQQFSGINAVIF--YTVQIFK--DAGSTIDSNLSTI-IVGVVNFFATFMGI 323
            ...     |..|:....|..:|.::|  |..|.|:  ...:.|.|.:.|| ...|:.||.|.:|:
pombe   350 PPFFKNRSSAALLACSSFFYLNYMLFAYYVPQYFQRIRGDNPIMSGVHTIPCAAVLCFFCTTVGM 414

  Fly   324 ILIDRLGRKI-LLYVSDI-------AMI--------------VTLSILG-GFFYCKAHGPDVSHL 365
            :| .:|||.: |:||..|       |||              .|:.:.| ||.:..   |.::..
pombe   415 VL-RKLGRYLPLIYVGYISCVAGMGAMICVNATTSMSKVMGLTTIFMFGSGFLFLP---PLIAMQ 475

  Fly   366 GWLP--------LTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFV---- 418
            ...|        .|...|..:|.|:|      :.:||::..:      .|..:|:...|:.    
pombe   476 ATFPPAMTSMATATLMFIRTMGGSIG------ITVGEVIFNE------RVTQSFDGNTTYAQLSY 528

  Fly   419 --VTKTFQDLTVAM-----GAHGAFWLFGAICIVGLFFVIIFVPETR 458
              |.:..|:|.:.:     .|....|:|..: ::.:.|..||..::|
pombe   529 KQVERLPQELQIRVKNTYASAFRVIWIFCTV-VMAIGFASIFFIKSR 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 113/544 (21%)
MFS 33..454 CDD:119392 110/536 (21%)
SPBC16A3.17cNP_596772.1 MFS 99..510 CDD:119392 100/472 (21%)
MFS_1 102..501 CDD:284993 96/454 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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