DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and ght2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_596425.1 Gene:ght2 / 2539977 PomBaseID:SPBC4B4.08 Length:531 Species:Schizosaccharomyces pombe


Alignment Length:440 Identity:108/440 - (24%)
Similarity:203/440 - (46%) Gaps:59/440 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAV-NVIMILCGRFLTGFCVGIA 139
            |::.:.:|.|.|...|:.:..|:|.:|:.....:|:..::...|| :.:.|:..:..||..:|..
pombe    67 GMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWVQIMVAKIWTGIGIGAL 131

  Fly   140 SLSLPVYLGETLQPEVRGTL----GLLPTALGNIGILVCYVAGSF---------------MNWSM 185
            |:..|.|..||..|.:|||:    .|..|  |.|.|..|...|:.               :.|.:
pombe   132 SVLAPGYQSETAPPSIRGTVVVTYQLFVT--GGIFIAACINMGTHKLHKTAQWRVSIGINLLWGI 194

  Fly   186 LAFLGAALPVPFLILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQS----QA 246
            :..:|          ::.:||:||:.:..|::|.|.:.|    .:.|::.|:.:|:...    ::
pombe   195 ITMIG----------ILFLPESPRYLIQVGKDEEAVRVL----SESAELFPDSEEVQNEYHRLKS 245

  Fly   247 DADRQATQNTC--LELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDS-NLST 308
            ..|.:.....|  ..:|.::......:.:.:|..||.:|.|...:|...:.:.||  |:| .||.
pombe   246 SIDEEFAGGPCSWASIFGKDIRYRTFLGMFVMSLQQLTGNNYFFYYGFSVMQGAG--INSPYLSA 308

  Fly   309 IIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTL---SILGGFFYCKAHGPDVSHLGWLPL 370
            :|:..|||..||.|:.:::|.||:..|.:..|...:..   |.:|.......:|...:..|.:.:
pombe   309 MILDAVNFGCTFGGMYVLERFGRRNPLIIGGIWQSICFFIYSAVGSRALYHKNGTSNTRAGAVMI 373

  Fly   371 TCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMG-AHG 434
            ....::|.||:..:.|..::::||..|.:.|...|:|.||.||...|:::.....:..::| .:|
pombe   374 VMACLFIFGFAQTWAPAAYVIVGESYPVRYRSKCAAVATASNWLWNFLISFFTPFIQASIGFKYG 438

  Fly   435 AFWLFGAICIVGLFFVIIFVPETRGKSLEEIERKMMGRVPMSSVVNIKPF 484
              ::|.:..:.|...:.:|..||:|.:||||....|      ||  |||:
pombe   439 --YVFASCNLTGAIVIFLFAKETKGLTLEEINELYM------SV--IKPW 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 102/421 (24%)
MFS 33..454 CDD:119392 94/408 (23%)
ght2NP_596425.1 MFS 14..456 CDD:119392 94/408 (23%)
Sugar_tr 15..471 CDD:278511 102/423 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9279
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R490
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
65.740

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