DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and ght5

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_587740.1 Gene:ght5 / 2539240 PomBaseID:SPCC1235.14 Length:546 Species:Schizosaccharomyces pombe


Alignment Length:462 Identity:108/462 - (23%)
Similarity:214/462 - (46%) Gaps:56/462 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 MTDRTITSFEVTKDAGSWVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAV 120
            :||    |:..:......:.|::.:.:..|.....||::.:|:|::|:...:.:::..:|...||
pombe    47 VTD----SYSYSSARQGLITGMVNVGSFFGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTAV 107

  Fly   121 -NVIMILCGRFLTGFCVGIASLSLPVYLGETLQPEVRGTLGLLPT----ALGNIGILVCYVAGSF 180
             :.:.|:..:..||..:|..|:..|.:..|....::|||  ::.|    ..|.|.|..|...|:.
pombe   108 PSWVQIMVAKIWTGLSIGALSVLAPGFQSEVAPADLRGT--IVTTYQLAVTGGIFIAACINMGTH 170

  Fly   181 ---------------MNWSMLAFLGAALPVPFLILMIIIPETPRWFVNRGQEERARKALKWLRGK 230
                           :.|.::.|:|    :.||      ||:||:.::.|::|.|.:.:  .:..
pombe   171 KLHKTAQWRVSMGINLLWGIITFIG----ISFL------PESPRYLISVGRDEEALQIM--AKNN 223

  Fly   231 EADVEPELKE----LMQSQADADRQATQNTCLELFKRNNLKPLSISLGLMFFQQFSGINAVIFYT 291
            :..:|.|:.:    :::|..:|:......|..|:|..:......:.||:|..||.:|.|...:|.
pombe   224 DLPIEHEVIQTEYHVIKSDCEAELAGGPATWPEIFGPDIRYRTFLGLGVMSLQQLTGDNYYFYYG 288

  Fly   292 VQIFKDAGSTIDSNLSTIIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSI---LGGFF 353
            .::|:..|.. ...||.:|:..|||..||.|:.:::..||::.|.:..:...:|..|   :|...
pombe   289 FEVFEGTGMN-SPYLSALILDAVNFGCTFGGLFVLEFFGRRMPLIIGALWQSITFFIYAAVGNRA 352

  Fly   354 YCKAHGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFV 418
            ..:.:|......|.:.:....::|..|:..:||..::::||..|.:.|...|:|.|..||...|:
pombe   353 LTRKNGTSNHRAGAVMIVFSCLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVATTGNWLWGFL 417

  Fly   419 VTKTFQDLTVAMG-AHGAFWLFGAICIVGLFFVIIFVPETRGKSLEEI-ERKMMGRVPMSSVVNI 481
            ::.....:|.::| .:|  ::|.|..:.....:.:|..||:|.:|||| |..:.|..|.      
pombe   418 ISFFTPFITNSIGFKYG--YIFAACNLCAACIIFLFAHETKGLTLEEINELYISGAKPW------ 474

  Fly   482 KPFPFNM 488
            .|.|.|:
pombe   475 MPRPKNL 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 102/439 (23%)
MFS 33..454 CDD:119392 94/425 (22%)
ght5NP_587740.1 MFS 10..451 CDD:119392 94/424 (22%)
Sugar_tr 11..467 CDD:278511 103/440 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9279
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
43.800

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