DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and ght1

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_587747.1 Gene:ght1 / 2538732 PomBaseID:SPCC548.07c Length:557 Species:Schizosaccharomyces pombe


Alignment Length:420 Identity:97/420 - (23%)
Similarity:193/420 - (45%) Gaps:45/420 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAV-NVIMILCGRFLTGFCVG 137
            :.|::.:.:..|.:...|..:.:|:|::|:...|.:::..::...|| :.:.|:..:..||..:|
pombe    61 ITGMVNVGSFFGCLISSPTTDRIGKRNSIIGFCVIYLIGVIIQVTAVPSWVQIMVAKIWTGLGIG 125

  Fly   138 IASLSLPVYLGETLQPEVRGTL----------GLLPTALGNIGILVCYVA-------GSFMNWSM 185
            ..|:..|.|..|...|.:|||:          |:...|..|:|....|..       |..:.|.:
pombe   126 ALSVLAPGYQSEVAPPHIRGTIVVTYQLCVTAGIFIAACINMGTHKLYKTAQWRVSIGINLLWGI 190

  Fly   186 LAFLGAALPVPFLILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPE----LKELMQSQA 246
            :..:|    |.||      .|:||:.|:.|:::.|.:.:    .|.|::.|:    ..|..|.::
pombe   191 ITLVG----VSFL------SESPRYLVSIGKDDEAIQVM----CKNAELPPDSDIIQTEYKQIKS 241

  Fly   247 DADRQATQNTCL--ELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTI 309
            |.:.......|.  |:|.:.......:.:.:|.|.|.:|.|...:|..|:||..|.. ...|:::
pombe   242 DCEAAVEGGPCTWPEIFGKEIRYRTFLGMAIMSFNQLTGCNYYFYYGTQVFKGTGME-SPYLASL 305

  Fly   310 IVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSI---LGGFFYCKAHGPDVSHLGWLPLT 371
            |:..|||..||.|:.:::..||::.|.:..:...:...|   :|.....:.:|......|.:.:.
pombe   306 ILDAVNFGCTFGGLFVLEYCGRRVPLIIGGVWQSICFFIYAAVGNRALTRKNGTSNHRAGAVMIV 370

  Fly   372 CFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMG-AHGA 435
            ...::|..|:..:||..::::||..|.:.|...|:|.|..||...|:::.....:|.::| .:| 
pombe   371 FSCLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVATTSNWLWNFLISFFTPFITNSIGFKYG- 434

  Fly   436 FWLFGAICIVGLFFVIIFVPETRGKSLEEI 465
             ::|.:..:.......:|..|::|.:||||
pombe   435 -YIFASCNLCASIVTFLFAHESKGLTLEEI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 97/420 (23%)
MFS 33..454 CDD:119392 90/407 (22%)
ght1NP_587747.1 MFS 10..452 CDD:119392 90/407 (22%)
Sugar_tr 11..467 CDD:278511 97/420 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9279
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
54.710

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