DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and Slc2a1

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_035530.2 Gene:Slc2a1 / 20525 MGIID:95755 Length:492 Species:Mus musculus


Alignment Length:446 Identity:134/446 - (30%)
Similarity:219/446 - (49%) Gaps:62/446 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YTSPALVSMTDRTITSFEVTKDAGSWVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVS 112
            |..| :.|.|..|:.|..|         .|..:..:.|..:.|..:...|||:::|...:...|:
Mouse    52 YGEP-IPSTTLTTLWSLSV---------AIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVA 106

  Fly   113 SLLIA---CAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVC 174
            ::|:.   ...:..|::.|||:.|...|:.:..:|:|:||.....:||.||.|......:|||:.
Mouse   107 AVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIA 171

  Fly   175 YVAG--SFMN----WSMLAFLGAALPVPFLILMIII---PETPRW-FVNRGQEERARKALKWLRG 229
            .|.|  |.|.    |.:|.   :.:.:|.|:..|::   ||:||: .:||.:|.||:..||.|||
Mouse   172 QVFGLDSIMGNADLWPLLL---SVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRG 233

  Fly   230 KEADVEPELKELMQSQADADRQATQNTCLELFKRNNLK-PLSISLGLMFFQQFSGINAVIFYTVQ 293
             .|||..:|:|:.:......|: .:.|.||||:....: |:.|::.|...||.||||||.:|:..
Mouse   234 -TADVTRDLQEMKEEGRQMMRE-KKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTS 296

  Fly   294 IFKDAG------STIDSNLSTIIVGVVNFFATFMGIILIDRLGRKILLYVS-------DIAMIVT 345
            ||:.||      :||.|       |:||...|.:.:.:::|.||:.|..:.       .:.|.:.
Mouse   297 IFEKAGVQQPVYATIGS-------GIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIA 354

  Fly   346 LSILGGFFYCKAHGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTA 410
            |::|...       |.:|:|..:.:..||.:   |.:|.|||||.::.|:.....| |||..|..
Mouse   355 LALLERL-------PWMSYLSIVAIFGFVAF---FEVGPGPIPWFIVAELFSQGPR-PAAIAVAG 408

  Fly   411 F-NWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFVPETRGKSLEEI 465
            | ||...|:|...||.:....|.: .|.:|..:.::...|....||||:|::.:||
Mouse   409 FSNWTSNFIVGMCFQYVEQLCGPY-VFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 134/446 (30%)
MFS 33..454 CDD:119392 127/433 (29%)
Slc2a1NP_035530.2 Sugar_tr 19..467 CDD:278511 134/446 (30%)
MFS 62..450 CDD:119392 123/420 (29%)
Monosaccharide binding. /evidence=ECO:0000250|UniProtKB:P11166 282..288 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 468..492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834354
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.740

Return to query results.
Submit another query.