DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and Y39B6A.41

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_741656.2 Gene:Y39B6A.41 / 189732 WormBaseID:WBGene00012699 Length:511 Species:Caenorhabditis elegans


Alignment Length:415 Identity:108/415 - (26%)
Similarity:185/415 - (44%) Gaps:56/415 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GPLIEYLGRRSTILATAVPFIVSS--LLIACAVN-----VIMILCGRFLTGFCVGIASLSLPVYL 147
            |.|::.|||:.|||..:...|:.|  :|.:..:|     ||..|....|.||.|     .|.:::
 Worm    79 GKLMDGLGRKETILLRSFLGIIGSMAMLTSLLLNRFEFYVIGHLIAGMLQGFRV-----VLIIWI 138

  Fly   148 GETLQPEVRGTLGLLPTALGNIGIL----VCY--VAGSFMNWSMLAFLGAALPVPFLILMIIIPE 206
            .|......||...|...:.|.|..|    :|.  :.|:...|..|..:.|.|....|||.|.:|:
 Worm   139 AECSPDSKRGLTSLFINSGGVIMTLLVTPLCLPSIWGNEALWVFLPCITALLATIHLILTIFLPK 203

  Fly   207 TPR-WFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNT--CLELFKRNNLKP 268
            :|: .|:.:..|..||:||::..|.|.  |.::.|.::.....::||.:.|  .|::.:..|.: 
 Worm   204 SPKHLFIQKSDEAGARRALRFYYGDEN--EKKIDEAIKEMIHENKQAKKETSGILDILQNRNHR- 265

  Fly   269 LSISLGLMFF----QQFSGINAVIFYTVQIFKDAGST-IDSNLSTIIVGVVNFFATFMGIILIDR 328
              .||.|:|.    ..|||:|....|.|.|....|.| .:|.::.:::..|:...:|:..::|::
 Worm   266 --FSLFLVFMCSLVPVFSGLNIKSQYLVDILISYGLTQSNSTIAIMVINTVSLPVSFIAPLIIEK 328

  Fly   329 LGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDV-SHLGW-----LPLTCFVIYILG---FSLGF 384
            .||:        .:.|.|:.|..|.:.....|:: ::.||     ....||.. |||   .:||.
 Worm   329 YGRR--------PIFVLLTWLCAFEWLGMSIPEMANNFGWNIDFRWIFACFSA-ILGQCAVNLGM 384

  Fly   385 GPIPWLMMGEILPAKIRGPAASVVTAFNWF--CTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGL 447
            ..:..:|:.|:.|..||    :.|:.|...  ....|.:.|...|:........:||.|.|...|
 Worm   385 LVMAPIMISELCPHNIR----ATVSQFTQVPPIGIAVLEVFMFPTLRSQFGFTMFLFLATCCAAL 445

  Fly   448 FFVI-IFVPETRGKSLEEIERKMMG 471
            ..:: ..:.||.|.:::||..::.|
 Worm   446 ATILHNQMLETAGLAVDEIFSRLSG 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 107/409 (26%)
MFS 33..454 CDD:119392 102/396 (26%)
Y39B6A.41NP_741656.2 MFS 28..458 CDD:391944 104/401 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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