DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and F53H8.3

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001359933.1 Gene:F53H8.3 / 186195 WormBaseID:WBGene00018779 Length:509 Species:Caenorhabditis elegans


Alignment Length:475 Identity:123/475 - (25%)
Similarity:221/475 - (46%) Gaps:67/475 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VSLCSLVVGFVSAYTS-----PALVSMTD----------RTITSFEVTKDAGSWVGGIMPLAALA 84
            :::.::|:|..:.:.|     ||.|.:||          :...|..|:....|:|...:.:.|:.
 Worm     8 ITVTTVVLGGSAQFYSYGVVNPAQVVITDWINQTYIDRYKAPLSLTVSNVIWSFVVSSIAIGAIL 72

  Fly    85 GGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVI---MILCGRFLTGFCVGIASLSLPVY 146
            |......:.|..|||:.:....:..:.::|....|....   :::.|||:.|..:|::|..:|:|
 Worm    73 GASFTRIIGEKYGRRNGMFFNGILNVFAALFELVAKRFSSPELLIFGRFVYGINMGLSSGLVPMY 137

  Fly   147 LGETLQPEVRGTLGLLPTALGNIGILVCY------------VAGSFMNWSMLAFLGAALP-VPFL 198
            |.|....:.||..|.|..      |.|.:            |.|...||. |||   ||| :|.|
 Worm   138 LMEITPYKYRGPAGTLHQ------IAVAFSDWFSLLIGLPEVLGDQNNWP-LAF---ALPGLPAL 192

  Fly   199 ILMIII---PETPRWFV-NRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTCLE 259
            .|:.|:   ||:|::.: .:...::|.|.::.|.|||.  .|.:.|.:..:...|.  ...|..|
 Worm   193 ALVCILPFCPESPKYTLGTKHDRDKALKDVELLIGKEQ--APHMFESIVREVALDE--GDGTFRE 253

  Fly   260 LFKRNNLK-PLSISLGLMFFQQFSGINAVIFYTVQIFKDAGST-IDSNLSTIIVGVVNFFATFMG 322
            ||.|.:|: ||::|:.:|..|||:|..||..::..:|.:||.| :.:..||:.:|:|.|......
 Worm   254 LFTRPDLRIPLAVSIIVMIAQQFTGCTAVFAFSTDMFLNAGLTPVIARFSTLAIGIVYFLFACTS 318

  Fly   323 IILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGWL---PLTCFVIYILGFSLGF 384
            ..||.::||:.|......:.:|.|.:|..|.:.:    :..::.|.   .:...|.|:..:.:| 
 Worm   319 PFLIHKVGRRWLSLFQLASCMVALMLLSLFTFLQ----NYENIEWARYGTIFSLVFYMCVYGVG- 378

  Fly   385 GPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGL-- 447
            .||||::..|:...:.|..|.:|.....|...|:|:.::......:|...:::.|    |:||  
 Worm   379 SPIPWIIASELFTQQFRATAVTVSVFVAWTFAFIVSTSYLPFQQLVGITFSYFPF----IIGLAV 439

  Fly   448 --FFVIIFVPETRGKSLEEI 465
              .|:.:.:||||.:.:.||
 Worm   440 FGIFIYVLLPETRDRPMVEI 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 123/475 (26%)
MFS 33..454 CDD:119392 117/462 (25%)
F53H8.3NP_001359933.1 MFS_GLUT_Class1_2_like 9..454 CDD:340915 121/467 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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