DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and F48E3.2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_509266.1 Gene:F48E3.2 / 185981 WormBaseID:WBGene00018603 Length:488 Species:Caenorhabditis elegans


Alignment Length:487 Identity:103/487 - (21%)
Similarity:213/487 - (43%) Gaps:78/487 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLAALSVSLCSLVVGFVSAYTSPAL----VSMTDRTITSFEVTKDAGSWVGGIMP----LAALAG 85
            :|:|:........:|:.:||.:.|:    :.:.:.....:.::.....|....|.    :...||
 Worm    10 ILSAVLAITAIFQMGYTNAYPNTAIGSFRIFLNESANEPYTLSNSEFEWAWSAMLAIYFIGFAAG 74

  Fly    86 GITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLG-- 148
            .:....:.:.:||:.|:.......::|||:...|:.:.|.|    :.||...:.|||..:.:.  
 Worm    75 SVISAGVADRIGRKWTLFLGTCGSLLSSLIALFAIILKMPL----MFGFSRLVMSLSAAISMNGL 135

  Fly   149 -----ETLQPEVRGTLGL---LPTALGNIGILVCYVAGSFMNWSMLAFLG-------AALPVPFL 198
                 |:....:||.:..   :...:.|:      :.|.|   .|.:.||       |...:|..
 Worm   136 ILLFQESSPSHMRGLISFNAEMAFVITNL------IGGLF---GMQSILGQNIVGLIAVSIIPSS 191

  Fly   199 I---LMIIIPETPRW-FVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQ-NTCL 258
            :   |.:.:.|:|:: |:.:.....|.:||::.:..: |.|.::..|...:.:.:....| |..|
 Worm   192 VACFLTVFLKESPKYLFLKKHDATEAGRALQFYQNIK-DEEEKMNVLNDLKLEKEEMGHQKNGSL 255

  Fly   259 ELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGST--IDSNLSTIIVGVVNFFATFM 321
            .....|........|||...|..:.:..|:||:.....|||.:  :..::||.:: .::..:|.:
 Worm   256 FDIMANQPVRRGFLLGLATMQLTASVWPVVFYSTDFLMDAGFSYELSESVSTGML-FLSSLSTIV 319

  Fly   322 GIILIDRLGRKILLYVS---DIAMIVTLSILGGFFYCKAHGPDVSH----LGWLPLTCFVIYILG 379
            |:.::::..||.||..:   :||.|:..|:          ...:||    :|:..:.|.:::.:.
 Worm   320 GMFIVEKYSRKWLLIGTASVNIAAILVFSL----------SAILSHYWTWIGYGCIICLILHGIS 374

  Fly   380 FSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNW-------FCTFVVTKTFQDLTVAMGAHGAFW 437
            :|:..|||.|.:..|::|...|..:.|:|.|.|.       |.||.:.||...:|:.:    .|.
 Worm   375 YSVAMGPIAWFITSELVPINFRAASQSLVLALNHTVALVLAFLTFPLYKTIGPITLVI----FFV 435

  Fly   438 LFGAICIVGLFFVIIFVPETRGKSLEEIERKM 469
            :.|.:||:   .:|:::|||:.|.:..|..::
 Worm   436 IPGILCII---MLILYLPETKDKHINVIVEQL 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 102/481 (21%)
MFS 33..454 CDD:119392 96/466 (21%)
F48E3.2NP_509266.1 MFS_GLUT_Class1_2_like 12..455 CDD:340915 100/474 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52445
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

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