DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and F11D5.7

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001367751.1 Gene:F11D5.7 / 184345 WormBaseID:WBGene00043980 Length:521 Species:Caenorhabditis elegans


Alignment Length:519 Identity:110/519 - (21%)
Similarity:212/519 - (40%) Gaps:127/519 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VSFSVPADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGSWVG 75
            ::|||          .|:::..::....|...|.|...|.   :|..:..||:       .:.||
 Worm    28 ITFSV----------LSEIITEMNNHTLSTHFGIVPTETK---LSFVNSIITT-------SNQVG 72

  Fly    76 GIMPLAALAGGITGGPLIEYLGRR--------STILATAVPFIVSSLLIACAVNVIMILCGRFLT 132
            ..:.:..|.      |:::|.||:        :.|.:|.:..::::|..|..|.::    |:||.
 Worm    73 NALSILLLL------PVVDYKGRKFVAVYLRFALIFSTGICHLLAALFQASEVFIL----GQFLL 127

  Fly   133 GFCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAG--SFMNWSMLAFLGAALPV 195
            |....:...:..:::.|:.....||...........|..||.:.:.  |.:..|.|.|:   .||
 Worm   128 GVQTSLRFFATQMFIVESSPDNCRGFASASLAFAFVISKLVMFSSSSPSLLGTSDLWFI---YPV 189

  Fly   196 PFLI-------LMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQAT 253
            ..:|       ||:.:||:|:|.:.:.:.:.|:.::|:..||:..::..:...::     :|..|
 Worm   190 FEMITATIIFCLMLHLPESPKWLIQQDKLDEAKMSIKFYHGKKCTIDEIVTSFIK-----ERNLT 249

  Fly   254 QNTCL---ELFKRNNLKP-LSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLS-TIIVGV 313
            ....:   |::....|:. |.|...::.|.:|........||:...|.||.|:...|: .:|:..
 Worm   250 NKNKISLKEVWDNETLREGLKIVFAVLLFLEFDTSYVTSVYTIDFHKSAGFTVQQALNINLIITT 314

  Fly   314 VNFFATFMGIILIDRLGRKILLYVSDI------AMIVTLSILGGFFYCKAHGPDVSHLGWLPLTC 372
            |.|...|:|..|:|.|||:.:|.::.|      .:|:::.|:   .|  |.|.     .||....
 Worm   315 VLFPTKFIGTFLLDALGRRPVLAIAGIIQFSRSCLILSVEII---IY--AFGS-----SWLTRIM 369

  Fly   373 FVIY----ILGFSLGFGPIPWLMMGEILP---------AKIRG------PAASVVTAFN------ 412
            ||:.    .:..:.|...|..|:..|:.|         ||:.|      |..|:....|      
 Worm   370 FVVVESLSPIASATGVNSIRLLLTMELFPSSARTVVGQAKLFGSMLIGTPIVSLFPIINSLFPPI 434

  Fly   413 WFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFVPETRGKS----LEEIERKMMGR 472
            :|..||:|:                     .::|: ::...:|||||::    :|.::|.:..|
 Worm   435 FFVPFVITQ---------------------LLLGI-YLFRHMPETRGRAVYDIIESLDRNVASR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 104/492 (21%)
MFS 33..454 CDD:119392 98/473 (21%)
F11D5.7NP_001367751.1 MFS 34..460 CDD:421695 103/485 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158124
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.