DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and F13B12.2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_501925.2 Gene:F13B12.2 / 177935 WormBaseID:WBGene00008730 Length:512 Species:Caenorhabditis elegans


Alignment Length:482 Identity:104/482 - (21%)
Similarity:203/482 - (42%) Gaps:90/482 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSF-----------EVTKDAGSWVGGI----MP 79
            :..:::.|..|.||:..     .|:::.::...:|           :::|...|.|..:    ..
 Worm    33 ICLITILLSILPVGYYI-----VLLNVPEKVFQAFIFDHFENIFGLQLSKTEESLVWSLTVSSQG 92

  Fly    80 LAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNV---IMILCGRFLTGFCVGIASL 141
            :.||.|.:...|:.::..:...:....|..|..|||:..:..:   |..:.||.|||...|:|..
 Worm    93 VGALIGCLIVSPISKFGAKDVLMRLNNVILIAGSLLMFLSYWITFPIAFIVGRILTGVYTGLACA 157

  Fly   142 SLPVYLGETLQPEVRGTLGLLPTALGNIGILVC------------YVAGSFMNWSMLAFLGAALP 194
            ..|:||.:.:...::|::...      :.|.||            ::.||...|.:|..|.|...
 Worm   158 FAPLYLQQIIPKNIKGSMSCF------LHIAVCFGSSLGAIFSLPFMFGSETTWPILVVLPAGFG 216

  Fly   195 VPFLILMIIIPETPRWFVNRGQEERARKALKWLRG-KEADVEPELKELMQSQADADRQATQNTCL 258
            :..|.....||:||...:..|:...|.:::|:... :::|.:..:||......:...|.  :.| 
 Worm   217 IIMLAASYFIPDTPNNLLQMGRYTEAIESIKFYYDIEDSDEDEIIKEYWDMVPEMPEQL--SLC- 278

  Fly   259 ELFKRNNLKPLSISLGLMF--FQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFM 321
            ..|..:::: ..|.||::.  .|.|||....|.|:.::| :|.|.||     |:|..:....:.:
 Worm   279 SAFSNSSIR-RGILLGMVVSATQIFSGSMVTISYSTEMF-EAVSFID-----ILVPFLPALGSIL 336

  Fly   322 GIIL-------IDRLGRKILL-------YVSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLP--- 369
            .|:|       ::..||:.||       .::::.:::...|          ..|.|  ||..   
 Worm   337 SILLTIPALRWVETRGRRPLLLKTLMFCIIANVFLLIFTLI----------SSDSS--GWASWGF 389

  Fly   370 LTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHG 434
            ...|.:|.:|::||.||:.:.:..|::|.:....:.....|.||.||...|..:..|:..:|.  
 Worm   390 AAAFFMYGIGYNLGVGPVAYFLPAELVPPEAASASLGAAVAVNWICTITTTLFYYPLSKTVGG-- 452

  Fly   435 AFWLFGAICI-VGLFFVIIF--VPETR 458
              |.:....| ..:|.:|::  :|||:
 Worm   453 --WSYLIFIIPTSIFSMILWRLLPETK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 104/481 (22%)
MFS 33..454 CDD:119392 101/473 (21%)
F13B12.2NP_501925.2 MFS_GLUT_Class1_2_like 34..479 CDD:340915 104/481 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.