DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and Y39E4B.5

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_499720.1 Gene:Y39E4B.5 / 176735 WormBaseID:WBGene00012716 Length:505 Species:Caenorhabditis elegans


Alignment Length:507 Identity:116/507 - (22%)
Similarity:209/507 - (41%) Gaps:102/507 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QVLAALSV-SLCSLVVGFVSAYTSPAL-------------------VSMTDRTITSFEVTKDAGS 72
            |.:..:|: :..|.:..|.|.:|:.::                   |...:.||..|: :.....
 Worm     4 QTIRLISIYAALSAITNFPSGFTNSSVNTAVEKLHKFIATSLRQPGVPDDENTIALFQ-SATLNC 67

  Fly    73 WVGGIMPLAALAGGITGGPLIEYLGRR--------STILATAVPFIVSSLLIACAVNVIMILCGR 129
            |.     :|.:.|.|....:.:..||:        :||.||.|.:     ...|......::.||
 Worm    68 WF-----VAQIFGAIMTPMISDGYGRKFGYIVCVTTTIFATFVQY-----FSICFYMPWGLILGR 122

  Fly   130 FLTGFCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSFMNWSMLAFLGAALP 194
            .||.....:....|.:|:.||...|:||    :.:.|..||.....|.|  |...|.:.||.:|.
 Worm   123 SLTALVSPLGDACLLLYVQETSPLEIRG----MSSFLCEIGYGTMCVLG--MVLGMKSVLGESLS 181

  Fly   195 -------VPF---LILMIIIPETPRW-FVNRGQEERARKALKWLRGKEADVEPELKELMQSQADA 248
                   :|.   |..::.|||||:: .:.|...|:|.|:|::.:|:.:|....:.| .|::...
 Worm   182 RLLLLSLIPLFCSLCFIVRIPETPKFLMIMRNDREKALKSLEFFQGESSDNAYIMSE-YQAEKMT 245

  Fly   249 DRQATQNTCLELFKRNNLKP------LSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTID-SNL 306
            |:.:..:|.::|..:.:|:.      .::||.|.|:       .::..:.....::|.::| :.:
 Worm   246 DKLSQDSTFVDLLSKWHLRQAMRLALATLSLTLSFY-------PILQSSTYFLLESGVSVDMAQI 303

  Fly   307 STIIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLT 371
            .:.:..||...::..|..:|||..|:.||....|...|.|.....|.:..|  ..||...|....
 Worm   304 CSTMAQVVLTLSSICGASIIDRFSRRKLLITFGILSNVLLVAFSFFSHLSA--TVVSPYSWPKYA 366

  Fly   372 C---FVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCT-FVVTKTFQDLTVAMGA 432
            |   .:.|.:.|.:..||:.|.:..|::..:.|             || |.......:|.:|:..
 Worm   367 CLASLLAYCISFGMVLGPLSWFVAPELVSQRHR-------------CTIFSACFAIHNLLIALTD 418

  Fly   433 HGA---FWLFGAICIVGLF---------FVIIFVPETRGKSLEEIERKMMGR 472
            ...   |.:||::|.|.||         ::.:|:|||.|||..:|..:|:.|
 Worm   419 FATIPLFRIFGSMCFVFLFVVPSFFCLCYIYLFMPETLGKSTLDIIHEMIDR 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 113/497 (23%)
MFS 33..454 CDD:119392 105/482 (22%)
Y39E4B.5NP_499720.1 MFS 13..458 CDD:391944 108/484 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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