DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and LOC100334818

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:XP_002665301.2 Gene:LOC100334818 / 100334818 -ID:- Length:484 Species:Danio rerio


Alignment Length:502 Identity:136/502 - (27%)
Similarity:231/502 - (46%) Gaps:76/502 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SQVLAALSVSLCSLVVGFVSA-YTSPALV---------------SMTDRTIT---SFEVT-KDAG 71
            :.::||:   |.||.:|:.:. ...||.|               |:.|.::|   |..|: ||.|
Zfish    14 TSIVAAV---LGSLQIGYQTGNINPPARVIEEFFNTTWRSRHNQSIPDHSLTFLWSLSVSIKDFG 75

  Fly    72 SWVGGIMPLAALAGGITGGPLIEYLGRRSTIL-ATAVPFIVSSLLI--ACAVNVIMILCGRFLTG 133
            :.:|.:        |:.|  |.:..|||:.|| |.|:....:||:.  ....:..:::.||.:.|
Zfish    76 ALLGSL--------GVKG--LADTFGRRNAILIANALSVAGASLMFMSEATASFEVLIVGRLIFG 130

  Fly   134 -FCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVA------GSFMNWSMLAFLGA 191
             ||..:.||: |:|:.......:||....|.......|||:..|.      |:...||::..| :
Zfish   131 LFCGLVMSLN-PLYIQGVSPTNLRGAFATLNQVFFASGILLGMVVGLETVLGTEKYWSLMLSL-S 193

  Fly   192 ALPVPFLILMI-IIPETPRW-FVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQ 254
            .:|.....|.: ..||:||: |:|||:||.|..||:.|||....|..|::|:.:..|.::...|.
Zfish   194 LIPATLQYLTLPFCPESPRYLFINRGKEEEAEAALRRLRGNPEMVMKEMEEMREEAAHSETGVTV 258

  Fly   255 NTCLELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTID-SNLSTIIVGVVNFFA 318
            ...|.  ||...:|:.:.|.:....|.||.||:|.|:.::|  |.|..| :...|:.||.||...
Zfish   259 REFLR--KRRYRQPIILVLIINLGSQLSGFNAIINYSTKMF--AQSNFDEATYLTLGVGAVNVAF 319

  Fly   319 TFMGIILIDRLGRKILLY-------VSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLTCFVIY 376
            |.:...|::|.||:.||.       :.::.|.:|.|||       ...|.:.::..|     |::
Zfish   320 TIVAFFLVERAGRRKLLLAGFLSLAICNLLMTITYSIL-------TIVPFIRNIQVL-----VVF 372

  Fly   377 IL--GFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLF 439
            .|  .:.:|.|||.|.:..|:.....|..|.:..:..||...||:...|..|....||: .:.||
Zfish   373 FLISAYEVGPGPISWFIAAELFDQSARPIAMAFTSMLNWGGKFVLALLFPPLLKICGAY-VYLLF 436

  Fly   440 GAICIVGLFFVIIFVPETRGKSLEEIERKMMGR--VPMSSVVNIKPF 484
            ..:.::...:.:..:|||:|::.::|..:..|.  :|:.:......|
Zfish   437 MCMALLAFTYTMFRLPETKGRTFDDIAAEFRGAEGIPLHNKTTFNTF 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 133/477 (28%)
MFS 33..454 CDD:119392 126/462 (27%)
LOC100334818XP_002665301.2 Sugar_tr 19..466 CDD:278511 132/478 (28%)
MFS 66..449 CDD:119392 116/411 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577235
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.