DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and SIT1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_010849.3 Gene:SIT1 / 856644 SGDID:S000000791 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:508 Identity:100/508 - (19%)
Similarity:178/508 - (35%) Gaps:166/508 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 PFVRQITEDGKPKLEVYRPTTN-PIY----IWTQVLAALSVSL-GSLVVGF----VSAYTSPALV 422
            |...::.:.|...:|:|....| |||    .::..|.|.:..| |::...|    .|:|:..:|:
Yeast    44 PSYIELIDPGVHNIEIYAEMYNRPIYRVALFFSLFLIAYAYGLDGNIRYTFQAYATSSYSQHSLL 108

  Fly   423 SMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACA 487
            |.                 |..|..:....|.|....|.:..||.:.::.:.:.:.:.:::.:.|
Yeast   109 ST-----------------VNCIKTVIAAVGQIFFARLSDIFGRFSIMIVSIIFYSMGTIIESQA 156

  Fly   488 VNVAMVLCGRFLAGFC---VGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAGSFM 549
            ||:.     ||..|.|   :|:..:.|              .|.::.:.|.|            :
Yeast   157 VNIT-----RFAVGGCFYQLGLTGIIL--------------ILEVIASDFSN------------L 190

  Fly   550 NWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKAL----KWLRGKEADVEP------ 604
            ||.:||....|||       |:|   ..|..|     ....|:    ||..|..|.:.|      
Yeast   191 NWRLLALFIPALP-------FII---NTWISG-----NVTSAIDANWKWGIGMWAFILPLACIPL 240

  Fly   605 -----ELKGLMRSQADADRQASRNTMLELLKLNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFK 664
                 .::.|.|..| .||...     |...||.||..|..:.:.|::                 
Yeast   241 GICMLHMRYLARKHA-KDRLKP-----EFEALNKLKWKSFCIDIAFWK----------------- 282

  Fly   665 DAGSTIDGNLCTIIVGIVNFLATFIGIVLID-----------RAGRKILLYVSDIAMVLTLFVLG 718
                 :|      |:|:: .:..|.|.||:.           :....|:..|....:||.|::|.
Yeast   283 -----LD------IIGML-LITVFFGCVLVPFTLAGGLKEEWKTAHIIVPEVIGWVVVLPLYMLW 335

  Fly   719 GFFYCKTYGPDVSHLGWLPLT---------CFVIYILGFSLGFGPIPWLMMGE----ILPAKIRG 770
            ...|.:       |    |||         .|...::.|.:.|.   |.|.|:    :|...:..
Yeast   336 EIKYSR-------H----PLTPWDLIQDRGIFFALLIAFFINFN---WYMQGDYMYTVLVVAVHE 386

  Fly   771 S--AASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIY 821
            |  :|:..|:...|.:.:|......:.:.:.....|.:||..|::..|.::::
Yeast   387 SIKSATRITSLYSFVSVIVGTILGFILIKVRRTKPFIIFGISCWIVSFGLLVH 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 98/494 (20%)
MFS 401..822 CDD:119392 90/470 (19%)
SIT1NP_010849.3 MFS_ARN_like 70..582 CDD:340880 92/482 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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