DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and ARN1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_011823.1 Gene:ARN1 / 856345 SGDID:S000001032 Length:627 Species:Saccharomyces cerevisiae


Alignment Length:472 Identity:97/472 - (20%)
Similarity:171/472 - (36%) Gaps:119/472 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 YTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVS 480
            ||..|..|.::.::.         |.:..|..:...|..|....|.:..||....::..:.::|.
Yeast    98 YTGYATSSYSEHSLL---------STINVINAVVSAASQIIYARLSDVFGRLYLFISAVILYVVG 153

  Fly   481 SLLIACAVNVAMVLCGR--FLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPT-AFGNIGILLC 542
            :::.:.|.:|.....|.  :.||: ||:. |.|.:.|.:....:.|.....:|| .|    |:..
Yeast   154 TIIQSQAYDVQRYAAGAIFYNAGY-VGVI-LILLIILSDFSSLKWRLLYQFVPTWPF----IINT 212

  Fly   543 FVAGSF-------MNWS----MLAFLGAALPVPFLILMFLIP----ETPRWFVGRGLEE------ 586
            ::||:.       :|||    |.||:.....||.::.|..:.    :||.|...:|.:.      
Yeast   213 WIAGNITSRANPVVNWSWDVGMWAFIFPLSCVPIVLCMLHMQWRARKTPEWHALKGQKSYYQEHG 277

  Fly   587 --RARKALKWLRGKEADVEPEL----------------KGLMRSQADA----------------- 616
              :..|.|.|:    .||...|                .|:..:..|:                 
Yeast   278 FIKILKQLFWM----LDVVGVLLMGCSLGCILVPLTLAGGVKTTWNDSRLIGPFVLGFVLIPILW 338

  Fly   617 --DRQASRNTMLELLKLNNLKPLSISLGLMFFQQFSGINAVIF-YTVQIFKDAGSTIDGNLCTII 678
              :.:.:|:.:|. .:|...:.:..|:|:.|...|....|..: |||.|.....|.........:
Yeast   339 IWEYRFARDPILP-YRLVKDRAVWSSMGISFLIDFIYYMAADYLYTVMIVAVNESVKSATRIATL 402

  Fly   679 VGIVNFLATFIGIVLIDRAGR--KILLY---VSDIAMVLTLFVLGG------------------- 719
            ...|:.:|:....:|:.|..|  ..:::   :..:||.|.....||                   
Yeast   403 SSFVSTVASPFFALLVTRCTRLKPFIMFGCALWMVAMGLLYHFRGGSQSHSGIIGALCVWGVGTT 467

  Fly   720 -FFYCKTYGPD--VSHLGWLPLTC--FVIYILGFSLG---FGPIPW--LMMGEILPAKIRGSAAS 774
             |.|..|....  |||.....:|.  :.:|.:|.::|   .|.| |  .:..:||  |..|..|.
Yeast   468 LFTYPVTVSVQSAVSHENMATVTALNYTLYRIGSAVGSAVSGAI-WTQTLYKQIL--KRMGDVAL 529

  Fly   775 VATAFNWFCTFVVTKTF 791
            ..||:....||:.|.|:
Yeast   530 ATTAYESPYTFIETYTW 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 97/472 (21%)
MFS 401..822 CDD:119392 97/472 (21%)
ARN1NP_011823.1 MFS_ARN_like 74..586 CDD:340880 97/472 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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