DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and SGE1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_015524.1 Gene:SGE1 / 856327 SGDID:S000006402 Length:543 Species:Saccharomyces cerevisiae


Alignment Length:516 Identity:108/516 - (20%)
Similarity:189/516 - (36%) Gaps:159/516 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 AALSVSL---GSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGS--WVGGIMPLAGLAGGIAGG 458
            :.||::|   ..|:..|::|.....:|::.|.....|   .|.|:  |:.....|:.....:..|
Yeast     3 STLSLTLCVISLLLTLFLAALDIVIVVTLYDTIGIKF---HDFGNIGWLVTGYALSNAVFMLLWG 64

  Fly   459 PLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGF-CVGIASLSLPVYLGETVQPE 522
            .|.|.||.:..::.:.:.|.:.||:.|.:.::|.::.||.:||| ..||.||:..|  |.::..|
Yeast    65 RLAEILGTKECLMISVIVFEIGSLISALSNSMATLISGRVVAGFGGSGIESLAFVV--GTSIVRE 127

  Fly   523 VRGTLGLLPTAFGNIGILLC-----FVAGSF---MNWSMLAFLGAALPV---PFLILMFL----I 572
              ...|::.||.. |..::.     |:.|:|   ::|....::.  ||:   .|:||.|.    .
Yeast   128 --NHRGIMITALA-ISYVIAEGVGPFIGGAFNEHLSWRWCFYIN--LPIGAFAFIILAFCNTSGE 187

  Fly   573 PETPRWFVGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQAS--RNTMLELL-KLNNL 634
            |....|     |..:.:|.:.:..|:          |::        ||  :||...|: ||:.:
Yeast   188 PHQKMW-----LPSKIKKIMNYDYGE----------LLK--------ASFWKNTFEVLVFKLDMV 229

  Fly   635 KPLSISLG---LMFFQQFSGIN-------AVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFI 689
            ..:..|.|   ||....|.|.|       .:.|:||           |.:..::....:|  .|:
Yeast   230 GIILSSAGFTLLMLGLSFGGNNFPWNSGIIICFFTV-----------GPILLLLFCAYDF--HFL 281

  Fly   690 GIVLIDRAGRKIL-LYVSDIAMVLTLFV--LGGFFYCKTY-----------------GPDVS--H 732
            .:..:....::|. |...:||....:|.  :.||..|..|                 .|.::  |
Yeast   282 SLSGLHYDNKRIKPLLTWNIASNCGIFTSSITGFLSCFAYELQSAYLVQLYQLVFKKKPTLASIH 346

  Fly   733 LGWLPL-----TCFVIYI-------------------------------LGFSLGFGPIPWLMMG 761
            |..|.:     |..:.|:                               |..|:|:..:|.:..|
Yeast   347 LWELSIPAMIATMAIAYLNSKYGIIKPAIVFGVLCGIVGSGLFTLINGELSQSIGYSILPGIAFG 411

  Fly   762 EILPAKIRGSAASV-------------ATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGA 809
            .|..|.:..|...:             .||||.|.        :.|..|.|.:....:|.|
Yeast   412 SIFQATLLSSQVQITSDDPDFQNKFIEVTAFNSFA--------KSLGFAFGGNMGAMIFTA 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 108/516 (21%)
MFS 401..822 CDD:119392 108/514 (21%)
SGE1NP_015524.1 MFS_Azr1_MDR_like 24..531 CDD:341045 102/495 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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