DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and VBA1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_013806.1 Gene:VBA1 / 855113 SGDID:S000004694 Length:562 Species:Saccharomyces cerevisiae


Alignment Length:492 Identity:97/492 - (19%)
Similarity:161/492 - (32%) Gaps:157/492 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 SVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGR 466
            |:.|||    |:|:..|..:.::.:|....|..:... .|:.....|...|.....|.|.:..||
Yeast    41 SLWLGS----FLSSLDSTIVANIMNRVAEEFSESSKK-QWIATSFLLTNTAFQPLYGKLSDITGR 100

  Fly   467 RNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTL-GLL 530
            ::.:|.....|.:..||...|.||......|.:.|...|..:....:.:.:......||.. |..
Yeast   101 KSALLTAQFFFGLGCLLTCFARNVTEFSIARAICGIGAGGLNAISSIAVSDICTARERGVYQGYA 165

  Fly   531 PTAFGNIGILLCFVAGSF---MNWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKAL 592
            ...||...:|...:.|.|   :.|..|    ..:.||.::|..::                  |:
Yeast   166 NIVFGFGQLLGAPLGGVFIETIGWRAL----FGIQVPVIMLCSVL------------------AI 208

  Fly   593 KWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLKLNNLKPLSI--SLGLMFFQQFSGINAV 655
            |.:..|...|.|                    |.|...|.||..:.|  ||.|:     :.|:.|
Yeast   209 KNINIKLFHVPP--------------------MKERYTLKNLSRIDIFGSLSLV-----ATISGV 248

  Fly   656 IFYTVQIFKDAGSTIDGNLCT-----IIVGIVNFLATFIGIVLIDR--AGRKILLY--------V 705
            :|                ||:     :.:.:.. :.:||..:|::|  |..|||.:        :
Yeast   249 LF----------------LCSSQLNKLYLALFT-IGSFIVFILVERYYATEKILPFELLTRSFCL 296

  Fly   706 SDIAMVLTLFVL-GGFFYCKTY-----------------GPDVS------HLGWLPLT------- 739
            |....|::.||: |..|....|                 .|.:|      ..||:...       
Yeast   297 SSAVTVISSFVVFGEIFRSPIYLQLLQNISVTKTGLFLIFPSISVAVGSLVTGWVLRNTKINLAH 361

  Fly   740 C--------FVIYILGFSLGFGPIPWLMMGEILP----------AKIRGSA---------ASVAT 777
            |        .::.:||..||:     .::..:.|          ...|.::         |||..
Yeast   362 CAYQIIFGGMIMQLLGLGLGY-----FLLSHLNPDYTIYDMLESITFRSNSIWWKLIYVFASVLV 421

  Fly   778 AFNWFCTFVVTKTFQDLTVAMGAH----GAFWLFGAI 810
            :|.:.|..|.|......||.....    |.|:|:.:|
Yeast   422 SFGYACLLVATLVSIVFTVEKSQQGTMTGVFYLWRSI 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 97/492 (20%)
MFS 401..822 CDD:119392 97/492 (20%)
VBA1NP_013806.1 MFS_Azr1_MDR_like 42..469 CDD:341045 96/491 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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