DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-1 and HXT2

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_013724.1 Gene:HXT2 / 855023 SGDID:S000004613 Length:541 Species:Saccharomyces cerevisiae


Alignment Length:559 Identity:133/559 - (23%)
Similarity:235/559 - (42%) Gaps:70/559 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 DFLTSR-QHFQQQRSISTDSRKSRRLYEMDEMDNKRGENIRHAVPFVRQITEDGKPKLEVYRPTT 388
            :|.||| :...||.||                         |:.|.|:::..|..| ::.....|
Yeast     3 EFATSRVESGSQQTSI-------------------------HSTPIVQKLETDESP-IQTKSEYT 41

  Fly   389 N------PI-YIWTQVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVG--- 443
            |      || ..||.:...|.::.|..|.|:.:. |....|:.||......::..|...::.   
Yeast    42 NAELPAKPIAAYWTVICLCLMIAFGGFVFGWDTG-TISGFVNQTDFKRRFGQMKSDGTYYLSDVR 105

  Fly   444 -----GIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLL-IACAVNVAMVLCGRFLAGF 502
                 ||..:....||:..|.|.:..|||..::...:.:||..:: ||.:........||.::|.
Yeast   106 TGLIVGIFNIGCAFGGLTLGRLGDMYGRRIGLMCVVLVYIVGIVIQIASSDKWYQYFIGRIISGM 170

  Fly   503 CV-GIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVA-------GSFMNWSMLAFLGA 559
            .| |||.|| |..:.||....:|||..........:||.|.:..       .:.:.|.:...|..
Yeast   171 GVGGIAVLS-PTLISETAPKHIRGTCVSFYQLMITLGIFLGYCTNYGTKDYSNSVQWRVPLGLNF 234

  Fly   560 ALPVPFLILMFLIPETPRWFVGRGLEERARKALKWLRGKEADVE-----PELKGLMRSQADADRQ 619
            |..:..:..|.::||:||:.|.:|..|.|:::|  .:..:..:|     .|:..:| :..:.:|.
Yeast   235 AFAIFMIAGMLMVPESPRFLVEKGRYEDAKRSL--AKSNKVTIEDPSIVAEMDTIM-ANVETERL 296

  Fly   620 ASRNTMLELLKLNNLKPLSISLGLMF--FQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIV 682
            |...:..||..........:.:|:|.  .||.:|.|...:|...||...|.. |....:|::|||
Yeast   297 AGNASWGELFSNKGAILPRVIMGIMIQSLQQLTGNNYFFYYGTTIFNAVGMK-DSFQTSIVLGIV 360

  Fly   683 NFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKTY-----GPDVSHLGWLPLTCFV 742
            ||.:||:.:..:|:.||:..|.....:|.:...:.........|     .|.....|.:.:....
Yeast   361 NFASTFVALYTVDKFGRRKCLLGGSASMAICFVIFSTVGVTSLYPNGKDQPSSKAAGNVMIVFTC 425

  Fly   743 IYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLF 807
            ::|..|::.:.||.::::.|..|.:::..|.::|...||...|::......:|.|:|....:...
Yeast   426 LFIFFFAISWAPIAYVIVAESYPLRVKNRAMAIAVGANWIWGFLIGFFTPFITSAIGFSYGYVFM 490

  Fly   808 GAICFVGLFFVIIYVPETQGKTLEDIERKMMGRVRRMSS 846
            |.:.| ..|:|..:|.||:|.|||::....:..|:...|
Yeast   491 GCLVF-SFFYVFFFVCETKGLTLEEVNEMYVEGVKPWKS 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 118/486 (24%)
MFS 401..822 CDD:119392 105/449 (23%)
HXT2NP_013724.1 Sugar_tr 59..519 CDD:395036 112/466 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342792
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13432
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
65.640

Return to query results.
Submit another query.