DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and AMF1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_015023.1 Gene:AMF1 / 854560 SGDID:S000005905 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:576 Identity:120/576 - (20%)
Similarity:182/576 - (31%) Gaps:211/576 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 EDGKPKLEVYRPTTNPIYIWTQVL--AALSVSLGSL-VVGFVSAYTSPALVSMTDRNITSFEVTQ 436
            :|.:||..::......:....|::  |.|..||..| ::|                  .||..| 
Yeast    32 QDERPKSLLWESAFVGVLCSAQLMTQAGLGQSLAPLHIIG------------------NSFGTT- 77

  Fly   437 DAG--SW--------VGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAV--N 489
            :||  ||        ||..:.:||..|.|.|......||        ...:.:.|||...:|  |
Yeast    78 NAGQLSWFASAYSLTVGTFILIAGRLGDIFGHKKFFVLG--------FFWYALWSLLAGFSVYSN 134

  Fly   490 VAMVLCGRFLAGFCVGIASLSLP---VYLGETVQPEVR--------------------------G 525
            .....|.|...|  :|.|.| ||   ..||.|.:|..|                          |
Yeast   135 QIFFDCCRAFQG--MGPAFL-LPNAIAILGRTYKPGRRKNMVFSLFGASAPGGFFLGAVFSSMLG 196

  Fly   526 TLGLLPTAFGNIGILLCFVAGSFMNWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARK 590
            .|...|.|:..:|| .|||         ||..|          .|:||.||       :..|...
Yeast   197 QLAWWPWAYWIMGI-ACFV---------LAVAG----------YFVIPHTP-------MPSRDAS 234

  Fly   591 ALKWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLKLN---NLKPL----------SISLG 642
            :.|.|  :..|....:.|                ::.|:..|   |..|:          .:.:|
Yeast   235 SFKLL--ERIDFAGSVTG----------------VVGLILFNFAWNQGPVVGWQTPYTYALLIVG 281

  Fly   643 LMFFQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVLI-------DRAGRK 700
            ..|...|:.|.:...:.:..|....|.....|..|..|..:|     ||.:.       |..|:.
Yeast   282 TFFLVIFAYIESRAAFPLLPFAALSSDTAFVLSCIAAGWASF-----GIWIFYTWQFMEDSRGQT 341

  Fly   701 ILLYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGWLPLTCFVIYILGFSLG-----FGPI----- 755
            .||..:..:.|    .:.||....|.|..:||..  |.|..:..:..|::|     ..|:     
Yeast   342 PLLSSAQFSPV----AISGFCAAVTTGFLLSHTP--PSTVMLFAMTAFTVGTILIATAPVHQTYW 400

  Fly   756 ----------PW----------LMMGEILPAKIRGSAAS-VATAFNWFCTFVVTKTFQDLTVAMG 799
                      ||          :|:.:.:|.:.:|.||| |.|..|:           .:::.:|
Yeast   401 AQTFVSIIVMPWGMDMSFPAATIMLSDSMPHEHQGLAASLVNTVVNY-----------SISIGLG 454

  Fly   800 AHGAF------------------WLFG-AICFVGLFFVIIYVPETQGKTLEDIERK 836
            ..|..                  |..| .:..:|:|....|...|..|:.:.|..|
Yeast   455 IAGTIESRVNDGGAKPLKGYRCSWYMGIGLSGLGIFVAATYAWSTFMKSKKRISEK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 115/564 (20%)
MFS 401..822 CDD:119392 110/532 (21%)
AMF1NP_015023.1 MFS_Amf1_MDR_like 48..493 CDD:341029 112/541 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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