DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and ITR2

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_014538.2 Gene:ITR2 / 854050 SGDID:S000005463 Length:609 Species:Saccharomyces cerevisiae


Alignment Length:596 Identity:140/596 - (23%)
Similarity:252/596 - (42%) Gaps:106/596 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 SSTD-SDEEGEDAEHKRLIHRPKDITKPVIIDLKDLESESDEDFLTSRQHFQQQRSISTDSRKSR 347
            :||| |..:||:..|::......|..||                        ::..:||.:.:.:
Yeast    32 ASTDQSSTQGEELHHRKHCEEDNDGQKP------------------------KKSPVSTSTMQIK 72

  Fly   348 RLYEMDEMDNKRGENIRHAVPFVRQIT-EDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVG 411
            ...:.||.|.:         ..::.:. ||....:..:..:.:|..|....:|::|    ..:.|
Yeast    73 SRQDEDEDDGR---------IVIKPVNDEDDTSVIITFNQSISPFIITLTFVASIS----GFMFG 124

  Fly   412 FVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVP 476
            :.:.|.|.||:|: :|::.:..:|......:.....|..|...:..|...:..|||..::.:.:.
Yeast   125 YDTGYISSALISI-NRDLDNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLM 188

  Fly   477 FIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILL 541
            |::.::|...|.....:..||.:.||.|||.||..|:::.|.....:||.|.::.:.:...|.|:
Yeast   189 FLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTVINSLWLTGGQLI 253

  Fly   542 CFVAGSFMN-----WSMLAFLGAALPVPFLILMF----LIPETPRWFVGRGLEERARKALKWLRG 597
            .:..|:.:|     |.:|  :|.:| :| .:|.|    .:|:|||::|.:|..:||:..||    
Yeast   254 AYGCGAGLNHVKNGWRIL--VGLSL-IP-TVLQFSFFCFLPDTPRYYVMKGDLKRAKMVLK---- 310

  Fly   598 KEADVEPELKGLMRSQADADRQASRNTMLELLKLN------------------------NLKPLS 638
                         ||..:.:.:.....:.||..||                        |.:.|.
Yeast   311 -------------RSYVNTEDEIIDQKVEELSSLNQSIPGKNPITKFWNMVKELHTVPSNFRALI 362

  Fly   639 ISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILL 703
            |..||...|||:|.|::::::..||:..|.. :.:..:|||...||:.|.|....||:.||:.:|
Yeast   363 IGCGLQAIQQFTGWNSLMYFSGTIFETVGFK-NSSAVSIIVSGTNFVFTLIAFFCIDKIGRRYIL 426

  Fly   704 YVSDIAMVLTLFVLGGFFY---CKTYGPDV-------SHLGWLPLTCFVIYILGFSLGFGPIPWL 758
            .:....|.:.|.:....|:   .|..|.|.       |..|.:.:...::|...::||.|.:|| 
Yeast   427 LIGLPGMTVALVICAIAFHFLGIKFNGADAVVASDGFSSWGIVIIVFIIVYAAFYALGIGTVPW- 490

  Fly   759 MMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVP 823
            ...|:.|..:||...|.|||.||..:.|:..||..:...:...|.|..|..:..:...|.....|
Yeast   491 QQSELFPQNVRGVGTSYATATNWAGSLVIASTFLTMLQNITPTGTFSFFAGVACLSTIFCYFCYP 555

  Fly   824 ETQGKTLEDIE 834
            |..|..||:::
Yeast   556 ELSGLELEEVQ 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 123/493 (25%)
MFS 401..822 CDD:119392 115/463 (25%)
ITR2NP_014538.2 MFS_HMIT_like 115..556 CDD:340918 116/468 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342408
Domainoid 1 1.000 166 1.000 Domainoid score I806
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9181
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2166
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.770

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