DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and VPS73

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_011411.3 Gene:VPS73 / 852774 SGDID:S000003072 Length:486 Species:Saccharomyces cerevisiae


Alignment Length:485 Identity:113/485 - (23%)
Similarity:199/485 - (41%) Gaps:89/485 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 AALSVSLGSLVVGF-VSAYTSPALVSMTDRNITSFEVTQDA----GSWVG--------------- 443
            |.:..|:||:..|: :|...:|..|    .:.:.|::..:.    .:|:|               
Yeast    31 AIIVASIGSIQFGYHLSELNAPQQV----LSCSEFDIPMEGYPYDRTWLGKRGYKQCIPLNDEQI 91

  Fly   444 GIMPLAGLAGGIAGG----PLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCV 504
            ||:......|||.|.    .|....||:.:.|......||.||:|..:.:...::.||.|.|...
Yeast    92 GIVTSVFCIGGILGSYFATSLANIYGRKFSSLINCTLNIVGSLIIFNSNSYRGLIIGRILVGISC 156

  Fly   505 GIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCF-----VAGSFMNWSMLAFLGAALPVP 564
            |...:.:|:::.|.......|.||.:......:|:||..     :..|: .|..:.|....:.|.
Yeast   157 GSLIVIIPLFIKEVAPSGWEGLLGSMTQICIRLGVLLTQGIALPLTDSY-RWRWILFGSFLIAVL 220

  Fly   565 FLILMFLIPETPRWFVGRGLEERARKALKWLRGKEAD-------------------VEPELKGLM 610
            ...:.|::.|:|:|.:..|....|:.:|..|||...|                   :||      
Yeast   221 NFFMWFIVDESPKWLLAHGRVTDAKLSLCKLRGVTFDEAAQEIQDWQLQIESGDPLIEP------ 279

  Fly   611 RSQADADRQASRNTMLELLK-LNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNL 674
               ...:..:..|::.:.|: ..|:|...:...|:|.|||.|||:::.|        |:.|...|
Yeast   280 ---TTTNSISGSNSLWKYLRDRTNVKSRHVITVLLFGQQFCGINSIVLY--------GTKIISQL 333

  Fly   675 -------CTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKTYGPDVSH 732
                   ....:.:||.|.|.:..:||....||.||..|.:.:.:|.|::|       ...:.:.
Yeast   334 YPQHAIRINFFISMVNVLVTILVSLLIHSLPRKPLLMTSTVLVSVTAFIMG-------IAMNHNK 391

  Fly   733 LGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVA 797
            :..|.:..| ||:..|::|..|:|:::|.|:...:....|....|..||..||::..||..:...
Yeast   392 MNLLIVFSF-IYMGVFTMGLNPLPFIIMREVSKPQDMVLAQRYGTICNWVGTFIIAYTFPIIHDV 455

  Fly   798 MGAHGAFWLFGAI-CFVGLFFVIIYVPETQ 826
            :..: .|.:|..| |.:.. |:...||||:
Yeast   456 LSGY-VFIIFAIIACSISA-FIWKKVPETK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 113/485 (23%)
MFS 401..822 CDD:119392 108/477 (23%)
VPS73NP_011411.3 MFS_GLUT_Class1_2_like 31..484 CDD:340915 113/485 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342641
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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