DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and VPS73

DIOPT Version :10

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_011411.3 Gene:VPS73 / 852774 SGDID:S000003072 Length:486 Species:Saccharomyces cerevisiae


Alignment Length:485 Identity:113/485 - (23%)
Similarity:199/485 - (41%) Gaps:89/485 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 AALSVSLGSLVVGF-VSAYTSPALVSMTDRNITSFEVTQDA----GSWVG--------------- 443
            |.:..|:||:..|: :|...:|..|    .:.:.|::..:.    .:|:|               
Yeast    31 AIIVASIGSIQFGYHLSELNAPQQV----LSCSEFDIPMEGYPYDRTWLGKRGYKQCIPLNDEQI 91

  Fly   444 GIMPLAGLAGGIAGG----PLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCV 504
            ||:......|||.|.    .|....||:.:.|......||.||:|..:.:...::.||.|.|...
Yeast    92 GIVTSVFCIGGILGSYFATSLANIYGRKFSSLINCTLNIVGSLIIFNSNSYRGLIIGRILVGISC 156

  Fly   505 GIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCF-----VAGSFMNWSMLAFLGAALPVP 564
            |...:.:|:::.|.......|.||.:......:|:||..     :..|: .|..:.|....:.|.
Yeast   157 GSLIVIIPLFIKEVAPSGWEGLLGSMTQICIRLGVLLTQGIALPLTDSY-RWRWILFGSFLIAVL 220

  Fly   565 FLILMFLIPETPRWFVGRGLEERARKALKWLRGKEAD-------------------VEPELKGLM 610
            ...:.|::.|:|:|.:..|....|:.:|..|||...|                   :||      
Yeast   221 NFFMWFIVDESPKWLLAHGRVTDAKLSLCKLRGVTFDEAAQEIQDWQLQIESGDPLIEP------ 279

  Fly   611 RSQADADRQASRNTMLELLK-LNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNL 674
               ...:..:..|::.:.|: ..|:|...:...|:|.|||.|||:::.|        |:.|...|
Yeast   280 ---TTTNSISGSNSLWKYLRDRTNVKSRHVITVLLFGQQFCGINSIVLY--------GTKIISQL 333

  Fly   675 -------CTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKTYGPDVSH 732
                   ....:.:||.|.|.:..:||....||.||..|.:.:.:|.|::|       ...:.:.
Yeast   334 YPQHAIRINFFISMVNVLVTILVSLLIHSLPRKPLLMTSTVLVSVTAFIMG-------IAMNHNK 391

  Fly   733 LGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVA 797
            :..|.:..| ||:..|::|..|:|:::|.|:...:....|....|..||..||::..||..:...
Yeast   392 MNLLIVFSF-IYMGVFTMGLNPLPFIIMREVSKPQDMVLAQRYGTICNWVGTFIIAYTFPIIHDV 455

  Fly   798 MGAHGAFWLFGAI-CFVGLFFVIIYVPETQ 826
            :..: .|.:|..| |.:.. |:...||||:
Yeast   456 LSGY-VFIIFAIIACSISA-FIWKKVPETK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 MFS_GLUT6_8_Class3_like 397..832 CDD:340916 113/485 (23%)
VPS73NP_011411.3 MFS_GLUT_Class1_2_like 31..484 CDD:340915 113/485 (23%)

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