DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and VVS1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_009800.1 Gene:VVS1 / 852543 SGDID:S000000445 Length:488 Species:Saccharomyces cerevisiae


Alignment Length:486 Identity:138/486 - (28%)
Similarity:213/486 - (43%) Gaps:66/486 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 TNPIYIWTQVLAALSVSLGSLVVGFVSA-------YTSPALVSMTDRNITSFEVTQDAGSWVG-- 443
            |.|:.....:|..:...|||:..|:..|       :.|.:.....|.|| |::.|     |||  
Yeast    16 TKPLITGHLILGTIVACLGSIQYGYHIAELNAPQEFLSCSRFEAPDENI-SYDDT-----WVGQH 74

  Fly   444 -----------------GIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVA 491
                             .|..:.||.|....|......||:...:..:...:|||||:..:.:..
Yeast    75 GLKQCIALTDSQYGAITSIFSIGGLFGSYYAGNWANRYGRKYVSMGASAMCMVSSLLLFFSNSYL 139

  Fly   492 MVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFV-----AGSFMNW 551
            .:|.||||.|...|.|.:..|:::.|....|.||.:|.:.....|:||||...     |.|: ||
Yeast   140 QLLFGRFLVGMSCGTAIVITPLFINEIAPVEWRGAMGSMNQVSINLGILLTQTLALKYADSY-NW 203

  Fly   552 SMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKALKWLR-GKEADVEPELKGLMRSQA- 614
            ..|.|.|:.:.|..::....:.|:|||.|..|....|..||..|| |.....:.|::...||.. 
Yeast   204 RWLLFSGSVIAVANILAWLKVDESPRWLVSHGFVSEAETALFKLRPGTYQQAKQEIQDWQRSHGH 268

  Fly   615 DADRQASRNT------MLELLKLNNLKPLSISLGLMFFQQFSGINAVIFYTV----QIFKDAGST 669
            :.|.::|..|      ...:...:..||.::.|.::..|||.|||::|||.|    :|..|....
Yeast   269 NRDPESSEETHSGPTLWQYVTDPSYKKPRTVILAILSCQQFCGINSIIFYGVKVIGKILPDYSIQ 333

  Fly   670 IDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAM-VLTLFVLGGFFYCKTYGPDVSHL 733
            ::     ..:.|:|.:.|.....:||..||:.||..|...| .::|.:..|.         ...:
Yeast   334 VN-----FAISILNVVVTLAASAIIDHVGRRPLLLASTTVMTAMSLLISVGL---------TLSV 384

  Fly   734 GWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAM 798
            .:|.:|...:||..|::|.||||:|::||:...:...:|.|..|..||..||:|...|......|
Yeast   385 SFLLVTATFVYIAAFAIGLGPIPFLIIGELSYPQDAATAQSFGTVCNWLATFIVGYLFPIGHGLM 449

  Fly   799 GAHGAFWLFGAICFVGLFFVIIYVPETQGKT 829
            |.: .|.:|.||..:...:|...||||:|||
Yeast   450 GGY-VFAIFAAIAAMFATYVYKRVPETKGKT 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 138/486 (28%)
MFS 401..822 CDD:119392 128/464 (28%)
VVS1NP_009800.1 MFS_GLUT_Class1_2_like 28..478 CDD:340915 132/471 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342643
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2166
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
54.770

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