DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and CIN10

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_010675.3 Gene:CIN10 / 851995 SGDID:S000002795 Length:555 Species:Saccharomyces cerevisiae


Alignment Length:513 Identity:121/513 - (23%)
Similarity:206/513 - (40%) Gaps:89/513 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 LAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIE 462
            |..:..::|.|:.|:.:...|..|:|:...:::...:|......:.....:....|.|...||.:
Yeast    41 LIFVGATIGGLLFGYDTGVISGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLAD 105

  Fly   463 YLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRG-- 525
            ..|||.|:......||::::.:|.|..:..::|||.|.|..||:::..:|::|.|.....:||  
Yeast   106 RYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFM 170

  Fly   526 -TLGLLPTAFGNIGILLCFVAGSFM-----NWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGL 584
             ||.::....|.   |:.:|..|.|     :|..|..|.|...:.||.::..|||:|||.:.:|.
Yeast   171 LTLNIIAITGGQ---LVSYVIASLMKEIDNSWRYLFALSAIPAILFLSILDFIPESPRWSISKGD 232

  Fly   585 EERARKALKWL-----------RGKEADVE----------------------------------- 603
            ....|.:|:.|           :.|:..:|                                   
Yeast   233 ILYTRDSLRMLYPTASTYHVNSKIKQLIIELDKLRLYEDASEPLLVQSQSVIRYMDSSTSGTLSP 297

  Fly   604 PELKGL--------------------MRSQADADRQASRNTMLELLKLNNLKPLSISLGLMFFQQ 648
            |.:|.|                    :|..|.....||.......::...::.|.:...||||||
Yeast   298 PNIKRLSSNTERTSNTMSSSSAYLSALRGPAPNGALASNKKKRHRMEPRTIRALIVGCMLMFFQQ 362

  Fly   649 FSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLT 713
            .:|.||.::|...||... :..:..|..|::...||:.||..:..:|..||:.:|..:.:.|.: 
Yeast   363 ITGFNAFMYYAAIIFSKF-NIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTV- 425

  Fly   714 LFVLGGFFYCKT-YGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVAT 777
                 |...|.. :|.|..:   |.|...|||:..::...|.:||..: |.||...|...||...
Yeast   426 -----GLLLCSVGFGHDQVN---LLLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIA 481

  Fly   778 AFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIER 835
            ..||.....|:.|:......:|......:|........|||..:.||.:|.:||::.|
Yeast   482 CTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWFFVYFWYPEVKGLSLEEVGR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 120/509 (24%)
MFS 401..822 CDD:119392 114/495 (23%)
CIN10NP_010675.3 MFS_HMIT_like 45..528 CDD:340918 114/496 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342406
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I956
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13428
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2166
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
76.820

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