DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-1 and GAL2

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_013182.1 Gene:GAL2 / 850770 SGDID:S000004071 Length:574 Species:Saccharomyces cerevisiae


Alignment Length:578 Identity:138/578 - (23%)
Similarity:242/578 - (41%) Gaps:108/578 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 PVIIDLKDLESESDEDFLTSRQHFQQQRSISTDSRKSRRLYEMDEMD-NKRGENIRHAVPFVRQI 373
            ||:    ..:.::.||.::|   ..:...:|..|:|    |..||:. .:.|.....:||    |
Yeast     9 PVV----SQQPQAGEDVISS---LSKDSHLSAQSQK----YSNDELKAGESGSEGSQSVP----I 58

  Fly   374 TEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDA 438
            ....||..|         |: |..|..|.|:.|..:.|:.:. |....|..|| .:..|.:....
Yeast    59 EIPKKPMSE---------YV-TVSLLCLCVAFGGFMFGWDTG-TISGFVVQTD-FLRRFGMKHKD 111

  Fly   439 GSW------VGGIMPLAGLA---GGI---AGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVA 491
            |:.      .|.|:.:..:.   |||   .||   :..||:.     .:..:||..::...:.:|
Yeast   112 GTHYLSNVRTGLIVAIFNIGCAFGGIILSKGG---DMYGRKK-----GLSIVVSVYIVGIIIQIA 168

  Fly   492 MV------LCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTL----GLLPTAFGNIGILLCFVAG 546
            .:      ..||.::|..||..::..|:.:.|.....:||||    .|:.||...:|....:...
Yeast   169 SINKWYQYFIGRIISGLGVGGIAVLCPMLISEIAPKHLRGTLVSCYQLMITAGIFLGYCTNYGTK 233

  Fly   547 SFMN-------------WSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKALKWLRGK 598
            |:.|             || |..:||         :.|:||:||:.......|.|::::    .|
Yeast   234 SYSNSVQWRVPLGLCFAWS-LFMIGA---------LTLVPESPRYLCEVNKVEDAKRSI----AK 284

  Fly   599 EADVEPELKG------LMRSQADADRQASRNTMLELL--KLNNLKPLSISLGLMFFQQFSGINAV 655
            ...|.||...      |:.:..:|::.|...:..||.  |....:.|.:.:.:..|||.:|.|..
Yeast   285 SNKVSPEDPAVQAELDLIMAGIEAEKLAGNASWGELFSTKTKVFQRLLMGVFVQMFQQLTGNNYF 349

  Fly   656 IFYTVQIFKDAGSTIDGNLCT-IIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGG 719
            .:|...|||..|  :|.:..| |::|:|||.:||..:..::..|.:..|.:....|:..:.:...
Yeast   350 FYYGTVIFKSVG--LDDSFETSIVIGVVNFASTFFSLWTVENLGHRKCLLLGAATMMACMVIYAS 412

  Fly   720 FFYCKTY-----GPDVSHLG--WLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVAT 777
            ....:.|     .|.....|  .:..|||  ||..::..:.|:.|::..|..|.:::....::|:
Yeast   413 VGVTRLYPHGKSQPSSKGAGNCMIVFTCF--YIFCYATTWAPVAWVITAESFPLRVKSKCMALAS 475

  Fly   778 AFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFF-VIIYVPETQGKTLEDIE 834
            |.||...|::......:|.|:..:..:...|  |.|.:|| |..:||||:|.:||:|:
Yeast   476 ASNWVWGFLIAFFTPFITSAINFYYGYVFMG--CLVAMFFYVFFFVPETKGLSLEEIQ 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 120/502 (24%)
MFS 401..822 CDD:119392 109/472 (23%)
GAL2NP_013182.1 Sugar_tr 74..534 CDD:278511 117/488 (24%)
MFS 75..518 CDD:119392 109/472 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342789
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13432
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
65.640

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