DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and GEX1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_009863.2 Gene:GEX1 / 850289 SGDID:S000000575 Length:615 Species:Saccharomyces cerevisiae


Alignment Length:473 Identity:106/473 - (22%)
Similarity:174/473 - (36%) Gaps:137/473 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 SAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFI 478
            |.||..|..|.::.::.         |.|..|..:..:...:....|.::.||....|...:.:|
Yeast    81 STYTGYATNSYSEHSLL---------STVQVINAVVSVGSQVVYSRLSDHFGRLRLFLVATIFYI 136

  Fly   479 VSSLLIACAVNVAMVLCGR--FLAGFCVGIASLSLPVYLGE-------------TVQPEVRGTLG 528
            :.:::.:.|..:.|...|.  :..|: || .:|.|.:.|.:             :..|.:     
Yeast   137 MGTIIQSQATRLTMYAAGSVFYNCGY-VG-TNLLLTLILSDFSSLKWRMFYQYASYWPYI----- 194

  Fly   529 LLPTAFGNIGILLCFVAGSFMNWS----MLAFLG--AALPVPFLIL--MFLIPETPRWFVGRGLE 585
            ::|...|||    ...|....|||    |.||:.  :|||:.||||  .:...:|..|   |.|:
Yeast   195 IIPWISGNI----ITAANPQKNWSWNIAMWAFIYPLSALPIIFLILYMKYKSSKTAEW---RSLK 252

  Fly   586 ERARKA-----------LKWLRGKEADVEPELKGLM------------RSQADADRQASRNTML- 626
            |:|||.           |.|        :.::.|::            .:.|:...|...|:.: 
Yeast   253 EQARKERTGGLFENLVFLFW--------KLDIVGILLITVSLGCILVPLTLANETSQKWHNSKII 309

  Fly   627 -----------------------ELL--KLNNLKPLSISLGLMFFQQFS-GINAVIFYTVQI--F 663
                                   .||  ||.:.:.:...||:.||..|: .|:....|.|.:  .
Yeast   310 ATLVSGGCLFFIFLYWEAKFAKSPLLPFKLLSDRGIWAPLGVTFFNFFTFFISCDYLYPVLLVSM 374

  Fly   664 KDAGSTIDGNLCTIIVGIVNFLAT----FIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCK 724
            |::.::     ...||.:.:|:|.    |..:::...  ||:.|.|  |.......|..|.|| |
Yeast   375 KESSTS-----AARIVNLPDFVAATASPFYSLLVAKT--RKLKLSV--IGGCAAWMVCMGLFY-K 429

  Fly   725 TYGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTK 789
            ..|...||.|.:..:    .|:|.|   |.:....:..||.|....|..:|.|...:        
Yeast   430 YRGGSGSHEGVIAAS----VIMGLS---GLLCSNSVIVILQAMTTHSRMAVITGIQY-------- 479

  Fly   790 TFQDLTVAMGA--HGAFW 805
            ||..|..|:||  .||.|
Yeast   480 TFSKLGAAIGASVSGAIW 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 106/473 (22%)
MFS 401..822 CDD:119392 106/473 (22%)
GEX1NP_009863.2 MFS_ARN_like 59..571 CDD:340880 106/473 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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