DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and SGB1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_178100.3 Gene:SGB1 / 844321 AraportID:AT1G79820 Length:495 Species:Arabidopsis thaliana


Alignment Length:511 Identity:149/511 - (29%)
Similarity:240/511 - (46%) Gaps:43/511 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 RRLYEMDEMDNKRGENIRHAVPFVRQITEDGKPKLEVYRPT------TNPIYIWTQVLA-ALSVS 404
            ||.|.:     .||.:|...||....::...|.:..|..||      .||  .|.:.|. .|..|
plant     5 RRTYTI-----MRGRHIDKRVPSKEFLSALDKAETAVRLPTGTGKDCGNP--SWKRSLPHVLVAS 62

  Fly   405 LGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAG----GPLIEYLG 465
            |.||:.|:.....:..|.|:      |.::.....:...|::....|.|...|    |.:.:.:|
plant    63 LTSLLFGYHLGVVNETLESI------SIDLGFSGNTIAEGLVVSTCLGGAFIGSLFSGLVADGVG 121

  Fly   466 RRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLG-- 528
            ||.....:|:|.||.:.:.|...::..:|.||||.|..:||......:|:.|.....||||.|  
plant   122 RRRAFQLSALPMIVGASVSASTESLMGMLLGRFLVGIGMGIGPSVTALYVTEVSPAYVRGTYGSS 186

  Fly   529 -LLPTAFGNIGILLCFV-AGSFMNWSMLAFLGAALPVPFL-ILMFLIPETPRWFVGRGLEERARK 590
             .:.|..|.:|.|...: |...:.|..:.|..:.:|...| :.|.|..|:|:|...||....|..
plant   187 TQIATCIGLLGSLFAGIPAKDNLGWWRICFWISTVPAAMLAVFMELCVESPQWLFKRGRAAEAEA 251

  Fly   591 ALKWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLKLNNLKPLSISLGLMFFQQFSGINAV 655
            ..:.|.| .:.|:..:..|::|....|..:::  :.|||...:.:.:.|...|...||.||||||
plant   252 VFEKLLG-GSYVKAAMAELVKSDRGDDADSAK--LSELLFGRSFRVVFIGSTLFALQQLSGINAV 313

  Fly   656 IFYTVQIFKDAG-STIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGG 719
            .:::..:||.|| .:...|:|   ||:.|.|.:.:.:||:|:.|||:||..|...|.::| .|..
plant   314 FYFSSTVFKKAGVPSASANIC---VGVCNLLGSTVAVVLMDKLGRKVLLIGSFAGMAVSL-GLQA 374

  Fly   720 FFYCKTYGPDVSHLGWLPLTC--FVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWF 782
            ..|.....|    .|.|.|:.  .::::|.|:.|.||:|.|::.||.|.::|.:|.:|..|.:|.
plant   375 IAYTSLPSP----FGTLFLSVGGMLLFVLSFATGAGPVPSLLLSEICPGRLRATALAVCLAVHWV 435

  Fly   783 CTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIERKMM 838
            ..|.|...|..:...:|:.....:||..|.|.:.||...|.||:||:|::||..::
plant   436 INFFVGLLFLRMLEQLGSVLLNAIFGFFCVVAVIFVQKNVVETKGKSLQEIEISLL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 138/469 (29%)
MFS 401..822 CDD:119392 125/432 (29%)
SGB1NP_178100.3 MFS_GLUT_like 60..477 CDD:340873 125/433 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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