DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and AT1G34580

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_174718.1 Gene:AT1G34580 / 840362 AraportID:AT1G34580 Length:506 Species:Arabidopsis thaliana


Alignment Length:483 Identity:139/483 - (28%)
Similarity:211/483 - (43%) Gaps:86/483 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 KPKLEVYRPT---------TNPIYIWTQVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFE 433
            ||.||.:.|:         ||...::...|              ::|:||...|           
plant    52 KPFLEKFFPSVLKKASEAKTNVYCVYDSQL--------------LTAFTSSLYV----------- 91

  Fly   434 VTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRF 498
                           |||...:....|....|||.|::.....|:..:|:...|.|:||::.||.
plant    92 ---------------AGLVASLVASRLTAAYGRRTTMILGGFTFLFGALINGLAANIAMLISGRI 141

  Fly   499 LAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAGSFMN---------WSML 554
            |.||.||..:.:.||||.|...|..||...:..:.|.::|:    ||.:.:|         |.:.
plant   142 LLGFGVGFTNQAAPVYLSEVAPPRWRGAFNIGFSCFISMGV----VAANLINYGTDSHRNGWRIS 202

  Fly   555 AFLGAALPVPFLIL-MFLIPETPRWFVGRGLEERARKALKWLRGKE--ADVEPELKGLMRSQADA 616
            ..| ||:|...:.: ...|.:||...:.||..:.|..:|..|||.|  ||||.||..|:||...|
plant   203 LGL-AAVPAAIMTVGCLFISDTPSSLLARGKHDEAHTSLLKLRGVENIADVETELAELVRSSQLA 266

  Fly   617 DRQASRNTMLELLKLNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAG-STIDGNLCTIIVG 680
            ....:...|..:|:......|.:::.:..|||.:||....||...:|:..| .:....:.|.|:|
plant   267 IEARAELFMKTILQRRYRPHLVVAVVIPCFQQLTGITVNAFYAPVLFRSVGFGSGPALIATFILG 331

  Fly   681 IVNFLATFIGIVLIDRAGRKILLYVSDIAMVL-----------TLFVLGGFFYCKTYGPDVSHLG 734
            .||..:..:..::|||.||:.|.....|.|:|           |:...|.....|.|...|    
plant   332 FVNLGSLLLSTMVIDRFGRRFLFIAGGILMLLCQIAVAVLLAVTVGATGDGEMKKGYAVTV---- 392

  Fly   735 WLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMG 799
             :.|.|  ||..||...:||:.||:..||.|.|||.:..|::.|.|:..||.:::||. .|:...
plant   393 -VVLLC--IYAAGFGWSWGPLSWLVPSEIFPLKIRPAGQSLSVAVNFAATFALSQTFL-ATLCDF 453

  Fly   800 AHGAFWLFGAICFVGLFFVIIYVPETQG 827
            .:|||..:|...|....|||:::|||:|
plant   454 KYGAFLFYGGWIFTMTIFVIMFLPETKG 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 136/479 (28%)
MFS 401..822 CDD:119392 127/444 (29%)
AT1G34580NP_174718.1 Sugar_tr 28..491 CDD:278511 139/483 (29%)
MFS 77..477 CDD:119392 128/452 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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