DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Tret1-1 and AT1G05030

DIOPT Version :9

Sequence 1:	NP_610693.1	Gene:	Tret1-1 / 36248	FlyBaseID:	FBgn0050035	Length:	857	Species:	Drosophila melanogaster
Sequence 2:	NP_171996.2	Gene:	AT1G05030 / 839340	AraportID:	AT1G05030	Length:	524	Species:	Arabidopsis thaliana

Alignment Length:	557	Identity:	146/557 - (26%)
Similarity:	250/557 - (44%)	Gaps:	60/557 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   300 LIHRPKDITKPVIIDLKDLESESDEDFLTSRQHFQQQRSISTDSRKSRRLYEMDEMDNKRGENIR 364
            |::||..:.:...            .:.|...|.::..|.|...|.|:|...:..:..|:.::..
plant     8 LLYRPNSMNRLTF------------SYPTRLAHSRKASSFSRFFRSSKRKKRVTTLSTKKPDDDH 60

  Fly   365 H--AVPFVRQITEDGKPKLEVYRPTTNPIYIWTQVLAALSV-SLGSLVVGFVSAYTSPALVSMTD 426
            .  .||..:...:.|                |......:|| |:.:.:.|:.....:..:||:.
plant    61 EISPVPPEKFSADLG----------------WLSAFPHVSVASMANFLFGYHIGVMNGPIVSIA- 108

  Fly   427 RNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVA 491
            |.: .||........|..|.......|.|..|||::..|.|.|.....:|.|:.:|:.|.|.::.
plant   109 REL-GFEGNSILEGLVVSIFIAGAFIGSIVAGPLVDKFGYRRTFQIFTIPLILGALVSAQAHSLD 172

  Fly   492 MVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLL---PTAFGNI-GILLCFVAGSFMNWS 552
            .:||||||.|..:|:.::.:|:|:.|....:.||:||.|   .|..|.| .:||...|....:|.
plant   173 EILCGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQIGTCLGIIFSLLLGIPAEDDPHWW 237

  Fly   553 MLAFLGAALPVPFLIL-MFLIPETPRWFVGRGLEERARKALK--WLRGKEAD--VEPELKGLMRS 612
            ......|::|...|.| |....|:|||....|..:.|:..::  | .|.|.:  || :.:.:|::
plant   238 RTMLYVASMPGFLLALGMQFAVESPRWLCKVGRLDDAKVVIRNIW-GGSEVEKAVE-DFQSVMKN 300

  Fly   613 QADADRQASRNT-MLELLKLNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNLCT 676
            ..     ::.|: .||||...:.:...|...|...|||:|||.|::::...|::.|.| .|...:
plant   301 SG-----SNLNSRWLELLDKPHSRVAFIGGSLFVLQQFAGINGVLYFSSLTFQNVGIT-SGAQAS 359

  Fly   677 IIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVL---GGFFYCKTYGPDVSHLGWLPL 738
            :.||:.||........|||:.|||.||..|.:.|.:::|::   .||...:.....:|.||.|
plant   360 LYVGVTNFAGALCASYLIDKQGRKKLLIGSYLGMAVSMFLIVYAVGFPLDEDLSQSLSILGTL-- 422

  Fly   739 TCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGA 803
                :||..|::|.||:..|::.|:...:.||.....:.:.:|...|:|...|.||....|....
plant   423 ----MYIFSFAIGAGPVTGLIIPELSSNRTRGKIMGFSFSVHWVSNFLVGLFFLDLVEKYGVGTV 483

  Fly   804 FWLFGAICFVGLFFVIIYVPETQGKTLEDIERKMMGR 840
            :..||::..:...|..::..||:|::||:||..:..|
plant   484 YASFGSVSLLAAAFSHLFTVETKGRSLEEIELSLNSR 520

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Tret1-1	NP_610693.1	SP	382..833	CDD:273317	129/464 (28%)
Tret1-1	NP_610693.1	MFS	401..822	CDD:119392	123/434 (28%)
AT1G05030	NP_171996.2	MFS_GLUT_like	85..504	CDD:340873	122/434 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0254
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X26
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810