DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-1 and AT1G08900

DIOPT Version :10

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_563828.2 Gene:AT1G08900 / 837411 AraportID:AT1G08900 Length:462 Species:Arabidopsis thaliana


Alignment Length:458 Identity:138/458 - (30%)
Similarity:231/458 - (50%) Gaps:27/458 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 TNPIYIWTQVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAG------SWVGGIM 446
            |:.:.:.|.|:.|     ||...|...:|:|||          ..::.::.|      |:...:|
plant    22 TSGLLLSTSVVVA-----GSFCYGCAMSYSSPA----------QSKIMEELGLSVADYSFFTSVM 71

  Fly   447 PLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSL 511
            .|.|:...:..|.:...:|||.|:..:.|..|...|.:|.|.::.|:..||...||.||:.|..:
plant    72 TLGGMITAVFSGKISALVGRRQTMWISDVCCIFGWLAVAFAHDIIMLNTGRLFLGFGVGLISYVV 136

  Fly   512 PVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAGSFMNWSMLAFLGAALPVPF-LILMFLIPET 575
            |||:.|......||...........:||.|.|..|:|.:|..||.| :|:|..| :|.:|.|||:
plant   137 PVYIAEITPKTFRGGFSYSNQLLQCLGISLMFFTGNFFHWRTLALL-SAIPSAFQVICLFFIPES 200

  Fly   576 PRWFVGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLKLNNLKPLSIS 640
            |||....|.::....:||.|||:.:|:..|...: |...:..|:.|::.:.:|..:.|...|.|.
plant   201 PRWLAMYGQDQELEVSLKKLRGENSDILKEAAEI-RETVEISRKESQSGIRDLFHIGNAHSLIIG 264

  Fly   641 LGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYV 705
            ||||..|||.|..|:..|..:||..||...|  :.|.|:.::....:.:.::.:||.||:.||.:
plant   265 LGLMLLQQFCGSAAISAYAARIFDKAGFPSD--IGTTILAVILIPQSIVVMLTVDRWGRRPLLMI 327

  Fly   706 SDIAMVLTLFVLGGFFYCKTYGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRG 770
            |.|.|.:..|.:|..:|.:..|........:.:...|.|:..|.:|.|.:||::|.||.|..::.
plant   328 SSIGMCICSFFIGLSYYLQKNGEFQKLCSVMLIVGLVGYVSSFGIGLGGLPWVIMSEIFPVNVKI 392

  Fly   771 SAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIER 835
            :|.|:.|..|||..:::..:| :..:...|.|.:::|..:..|.:.|:...||||:|:|||:|:.
plant   393 TAGSLVTMSNWFFNWIIIYSF-NFMIQWSASGTYFIFSGVSLVTIVFIWTLVPETKGRTLEEIQT 456

  Fly   836 KMM 838
            .::
plant   457 SLV 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 MFS_GLUT6_8_Class3_like 397..832 CDD:340916 134/441 (30%)
AT1G08900NP_563828.2 MFS_GLUT6_8_Class3_like 26..453 CDD:340916 135/446 (30%)

Return to query results.
Submit another query.