DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and AT5G61520

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_200960.2 Gene:AT5G61520 / 836273 AraportID:AT5G61520 Length:514 Species:Arabidopsis thaliana


Alignment Length:531 Identity:142/531 - (26%)
Similarity:232/531 - (43%) Gaps:111/531 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 RLYEMDEMD-NKRGENIRHAVPFVRQITEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVG 411
            ::|::.|.| .:||.:..|...|.                        :|:|.:.:.||      
plant    61 KVYKLQEEDRRRRGNSNNHYCLFN------------------------SQLLTSFTSSL------ 95

  Fly   412 FVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVP 476
            :||...:..|.|...|            ||                       ||:.:|....|.
plant    96 YVSGLIATLLASSVTR------------SW-----------------------GRKPSIFLGGVS 125

  Fly   477 FIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILL 541
            |:..:.|...|.||||::..|.|.|..||.|:.|:|:||.|....:.||       |..| |..|
plant   126 FLAGAALGGSAQNVAMLIIARLLLGVGVGFANQSVPLYLSEMAPAKYRG-------AISN-GFQL 182

  Fly   542 C----FVAGSFMNWS--------MLAFLGAALPVPFLIL--MFLIPETPRWFV-GRGLEERARKA 591
            |    |::.:.:|:.        .::...||:|...|.|  :|| ||||...: ..|...:....
plant   183 CIGIGFLSANVINYETQNIKHGWRISLATAAIPASILTLGSLFL-PETPNSIIQTTGDVHKTELM 246

  Fly   592 LKWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLKLNNLKPLSISLGLMFFQQFSGINAVI 656
            |:.:||.. ||:.||..|:.:.:.:|..:  |..|:||:......|.::|.:.||||.:|||.|.
plant   247 LRRVRGTN-DVQDELTDLVEASSGSDTDS--NAFLKLLQRKYRPELVMALVIPFFQQVTGINVVA 308

  Fly   657 FYTVQIFKDAGSTIDGNL-CTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGF 720
            ||...:::..|....|:| .|::.|||...:|.:.::::||.|||.|..:..:.|:::...:|..
plant   309 FYAPVLYRTVGFGESGSLMSTLVTGIVGTSSTLLSMLVVDRIGRKTLFLIGGLQMLVSQVTIGVI 373

  Fly   721 FYCKTYGPDVSHLGW----LPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNW 781
            .........|...|:    :.|.|  :|:.||...:||:.||:..||.|.:||..|.||..|.::
plant   374 VMVADVHDGVIKEGYGYAVVVLVC--VYVAGFGWSWGPLGWLVPSEIFPLEIRSVAQSVTVAVSF 436

  Fly   782 FCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIERKMMGR------ 840
            ..||.|.::...:.....| |.|:.:|....|....|.:::|||:...:|    |::|.      
plant   437 VFTFAVAQSAPPMLCKFRA-GIFFFYGGWLVVMTVAVQLFLPETKNVPIE----KVVGLWEKHWF 496

  Fly   841 VRRMSSVANIK 851
            .|||:|..:|:
plant   497 WRRMTSKRDIQ 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 128/470 (27%)
MFS 401..822 CDD:119392 122/440 (28%)
AT5G61520NP_200960.2 MFS_STP 30..478 CDD:340919 131/496 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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