DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and AT5G18840

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_568367.1 Gene:AT5G18840 / 832002 AraportID:AT5G18840 Length:482 Species:Arabidopsis thaliana


Alignment Length:502 Identity:164/502 - (32%)
Similarity:252/502 - (50%) Gaps:57/502 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 DNKRGENIRHAVPFVRQITEDGKPKL----EVYRPTTNPIYIWTQVLAALSVSL-GSLVVGFVSA 415
            |.:|||       .|.::.:.|||.|    :......|..|:  .||.:..|:: ||...|....
plant     8 DVERGE-------IVNKVEDLGKPFLTHEDDEKESENNESYL--MVLFSTFVAVCGSFEFGSCVG 63

  Fly   416 YTSPALVSM-TDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIV 479
            |::|...|: .|.|::..|.     |..|.|:.:..:.|.:..|.:.::.||:.. :.|:..|.:
plant    64 YSAPTQSSIRQDLNLSLAEF-----SMFGSILTIGAMLGAVMSGKISDFSGRKGA-MRTSACFCI 122

  Fly   480 SSLLIACAVNVAMVL-CGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCF 543
            :..|.......|::| .|||..|:.:|:.|..:|||:.|.....:||.|..|......||..:.|
plant   123 TGWLAVFFTKGALLLDVGRFFTGYGIGVFSYVVPVYIAEISPKNLRGGLTTLNQLMIVIGSSVSF 187

  Fly   544 VAGSFMNWSMLAFLGAALPVPFLILMF---LIPETPRWFVGRGLEERARKALKWLRGKEADVEPE 605
            :.||.::|..||..|.|   |.::|:|   .|||:|||....|.|:..|.||:.||||:||:..|
plant   188 LIGSLISWKTLALTGLA---PCIVLLFGLCFIPESPRWLAKAGHEKEFRVALQKLRGKDADITNE 249

  Fly   606 LKGLMRS-QADADRQASRNTMLELL---KLNNL------KPLSISLGLMFFQQFSGINAVIFYTV 660
            ..|:..| ||           ||:|   ::.:|      :.:.|.:.||.||||.|||.:.||..
plant   250 ADGIQVSIQA-----------LEILPKARIQDLVSKKYGRSVIIGVSLMVFQQFVGINGIGFYAS 303

  Fly   661 QIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKT 725
            :.|..||.| .|.|.||.:..|....|.:|.:|||::||:.|:.:|...:.|...:.|..|..| 
plant   304 ETFVKAGFT-SGKLGTIAIACVQVPITVLGTILIDKSGRRPLIMISAGGIFLGCILTGTSFLLK- 366

  Fly   726 YGPDVSHLGWLPLTC---FVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVV 787
             |..:. |.|:|...   .:||:..||:|.||:||::|.||.|..::|.|.|:....||...:.|
plant   367 -GQSLL-LEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKGIAGSLVVLVNWSGAWAV 429

  Fly   788 TKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIE 834
            :.||..| ::..:.|.|:|:.|.....:.||...||||:|||||:|:
plant   430 SYTFNFL-MSWSSPGTFYLYSAFAAATIIFVAKMVPETKGKTLEEIQ 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 154/469 (33%)
MFS 401..822 CDD:119392 141/439 (32%)
AT5G18840NP_568367.1 MFS_GLUT6_8_Class3_like 45..473 CDD:340916 150/452 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 292 1.000 Domainoid score I356
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I822
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm972
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.930

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