DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and TMT3

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_001190054.1 Gene:TMT3 / 824312 AraportID:AT3G51490 Length:737 Species:Arabidopsis thaliana


Alignment Length:727 Identity:143/727 - (19%)
Similarity:247/727 - (33%) Gaps:305/727 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 VLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIA----G 457
            ||.||:.::|:::.|:.:|..:.|::.:.    ..|.:.::..  :.|::....|.|...    .
plant     5 VLVALAAAIGNMLQGWDNATIAGAVIYIK----KEFHLEKEPK--IEGLIVAMSLIGATLITTFS 63

  Fly   458 GPLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPE 522
            ||:.:.:|||:.::.::|.:.:||:::..:.||.::|..|.|.||.:|:|...:|:|:.||...|
plant    64 GPVSDKVGRRSMLILSSVLYFLSSIVMFWSPNVYVLLFARLLDGFGIGLAVTLVPIYISETAPSE 128

  Fly   523 VRGTLGLLPTAFGNIGILL--CFVAGSFM----NWSMLAFLGAALPVP----FLILMFLIPETPR 577
            :||.|...|...|:.|:.|  |.|.|..:    :|.::  || .|.:|    |::..|.:||:||
plant   129 IRGLLNTFPQFCGSGGMFLSYCLVFGMSLQESPSWRLM--LG-VLSIPSIAYFVLAAFFLPESPR 190

  Fly   578 WFVGRGLEERARKALKWLRGKEADVEPEL------------------------------------ 606
            |.|.:|..:.||:.|:.|||:| ||..||                                    
plant   191 WLVSKGRMDEARQVLQRLRGRE-DVSGELALLVEGLGVGKDTSIEEYVIGPDNEENEGGNELPRK 254

  Fly   607 ----------------------------------------------------------------- 606
                                                                             
plant   255 DQIKLYGPEDGQSWMAKPVKGQSSLALASRQGSMLPRGGSLMDPLVTLFGSIHENLPSENMNASS 319

  Fly   607 --------------KGLMRSQADADRQ-------------------------------------- 619
                          .|...||.|.:|.                                      
plant   320 RSMLFPNMGSILGMMGRQESQWDPERNNEDSSDQDENLNSPLLSPQTTEPDDYHQRTVGTMHRRQ 384

  Fly   620 ---------------------------------------------------ASRNT--------- 624
                                                               |:.||         
plant   385 SSLFMANVGETATATSIGGGWQLAWKYNDKVGADGKRVNGGLQRMYIHEETANNNTNNIPFSRRG 449

  Fly   625 ---------------------------------------ML-----------ELLKLNNLKPLSI 639
                                                   ||           ||.:....:.|.:
plant   450 SLLSFHPEGDGHDQVNGYVQAAALVSQASMMPGGKGETAMLPKEVKDGPGWRELKEPGVKRALMV 514

  Fly   640 SLGLMFFQQFSGINAVIFYTVQIFKDAG-STIDGNL------CTIIVGIVNFL----ATFIGIVL 693
            .:||...|||:|||.|::||.||.::.| |::..||      .::::..:..|    ...:.:.|
plant   515 GVGLQILQQFAGINGVMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLPCILVSMRL 579

  Fly   694 IDRAGRKILLYVSDIAMVLTL--FVLGGFFYCKTYGPDVSHLGWLPLTCFVIYILGFSLGFGPIP 756
            :|..||:.|:..:...::|:|  .|:|...   ..|..::.|  :......:|:..|.:|||.||
plant   580 MDVTGRRSLMLSTIPILILSLVTLVIGSLV---NLGGSINAL--ISTASVTVYLSCFVMGFGAIP 639

  Fly   757 WLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIY 821
            .::..||.|..:||...::.....|.|..:||.|...:..::|..|.|.::..:|.|...||.:.
plant   640 NILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFVYLK 704

  Fly   822 VPETQGKTLEDI 833
            ||||:|..||.|
plant   705 VPETKGMPLEVI 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 142/725 (20%)
MFS 401..822 CDD:119392 132/710 (19%)
TMT3NP_001190054.1 MFS 9..>186 CDD:119392 48/185 (26%)
MFS <512..703 CDD:119392 54/195 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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