DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and PMT5

DIOPT Version :10

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_188513.1 Gene:PMT5 / 821416 AraportID:AT3G18830 Length:539 Species:Arabidopsis thaliana


Alignment Length:509 Identity:149/509 - (29%)
Similarity:236/509 - (46%) Gaps:60/509 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 PFVRQITEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVGFVSAYTSPALVSM-TDRNITS 431
            |.|:.:.|...|.    :|.....|.:.   .|:..|:.|:::|:.....|.|::.: .|..|..
plant    15 PPVKHVPESVLPA----KPPKRNNYAFA---CAILASMTSILLGYDIGVMSGAMIYIKRDLKIND 72

  Fly   432 FEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCG 496
            .::...|||     :.:..|.|..|.|...:::|||.||:.....|...::|:..:.|.|.::.|
plant    73 LQIGILAGS-----LNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFLMFG 132

  Fly   497 RFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAG-SFMN------WSML 554
            ||:||..||.|.:..|||..|......||.|...|..|.|.||:|.:|:. :|.|      |.::
plant   133 RFIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSNLPLKVGWRLM 197

  Fly   555 AFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKAL-----------------KWLRGKEADV 602
            ..:||...|...|.:..:||:|||.|.:|....|::.|                 |...|..||.
plant   198 LGIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVLDKTSDSPTEATLRLEDIKHAAGIPADC 262

  Fly   603 EPELKGLMRSQADADRQASRNTMLELLKLNNLKP-------LSISLGLMFFQQFSGINAVIFYTV 660
            ..::..:.|..:..:     ....|||    ::|       :..::|:.||||.|||:||:.::.
plant   263 HDDVVQVSRRNSHGE-----GVWRELL----IRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSP 318

  Fly   661 QIFKDAGSTIDGN--LCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYC 723
            :|||.||...|..  |.|:.||:|......:...|:||.||:.||..|...|||:|..||...  
plant   319 RIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSL-- 381

  Fly   724 KTYGPDVSHLGW---LPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTF 785
            .........:.|   :.:...:.|:..||:|.|||.|:...||.|.::|...:|:....|...:.
plant   382 TIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSG 446

  Fly   786 VVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIERKMMG 839
            |::.:|..::.||...|||:|||.|..|...|...::|||||:.|||::....|
plant   447 VISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYTFLPETQGRMLEDMDELFSG 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 MFS_GLUT6_8_Class3_like 397..832 CDD:340916 140/471 (30%)
PMT5NP_188513.1 MFS_PLT 42..494 CDD:340995 140/467 (30%)

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