DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and VGT1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_186959.2 Gene:VGT1 / 821117 AraportID:AT3G03090 Length:503 Species:Arabidopsis thaliana


Alignment Length:497 Identity:147/497 - (29%)
Similarity:246/497 - (49%) Gaps:49/497 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 ITEDGKPKLEVYRPTTNPIYIWTQVLAA----LSVSLGSLVVGFVSAYTSPALVSM---TDRNIT 430
            ||.:.:|.|:......|     ..||||    |..:||:|:.|:....||.|::|:   |...|:
plant    25 ITAEKEPLLKENHSPEN-----YSVLAAIPPFLFPALGALLFGYEIGATSCAIMSLKSPTLSGIS 84

  Fly   431 SFEVTQ-DAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVL 494
            .::::. |.|....|.: ...|.|.|....:.:.:|||..::..|..::|.:::...|...::::
plant    85 WYDLSSVDVGIITSGSL-YGALIGSIVAFSVADIIGRRKELILAAFLYLVGAIVTVVAPVFSILI 148

  Fly   495 CGRFLAGFCVGIASLSLPVYLGETVQPEVRG---TLGLLPTAFGNIG------ILLCFVAGSFMN 550
            .||...|..:|:...:.|:|:.||...::||   :|....|..|.:|      :.:..::|    
plant   149 IGRVTYGMGIGLTMHAAPMYIAETAPSQIRGRMISLKEFSTVLGMVGGYGIGSLWITVISG---- 209

  Fly   551 WSMLAFLGAALPVPFLI--LMFLIPETPRWFV---------GRGLEERARKALKWLRGKE-ADVE 603
            |..:  ....||.|.::  .|..:|.:|||.:         |..|::.|.::|..|||.. ||..
plant   210 WRYM--YATILPFPVIMGTGMCWLPASPRWLLLRALQGQGNGENLQQAAIRSLCRLRGSVIADSA 272

  Fly   604 PELKGLMRSQADADRQASRNTMLELLKLNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAG- 667
            .|....:.::.....:....|..||.:...||.|:|:.||:.|||.:|..:|::|...|.:.|| 
plant   273 AEQVNEILAELSLVGEDKEATFGELFRGKCLKALTIAGGLVLFQQITGQPSVLYYAPSILQTAGF 337

  Fly   668 -STIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKTYGPDVS 731
             :..|....:|::|::..:.|.:.:::|||.||:.||......||::||:||.::......|.|:
plant   338 SAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVISLFLLGSYYMFYKNVPAVA 402

  Fly   732 HLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTV 796
                  :...::|:..:.|.||||.|||:.||.|.|:||...|:|...|:....:||..|..|..
plant   403 ------VAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKE 461

  Fly   797 AMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIERKMM 838
            .:||...|..||.||.|.|||:...||||:|.|||:||.|.:
plant   462 LLGAGILFCAFGVICVVSLFFIYYIVPETKGLTLEEIEAKCL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 140/481 (29%)
MFS 401..822 CDD:119392 127/447 (28%)
VGT1NP_186959.2 MFS_GLUT10_12_Class3_like 53..498 CDD:340920 134/457 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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