DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and AT2G18480

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_179438.1 Gene:AT2G18480 / 816363 AraportID:AT2G18480 Length:508 Species:Arabidopsis thaliana


Alignment Length:478 Identity:146/478 - (30%)
Similarity:224/478 - (46%) Gaps:57/478 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 ALSVSLGSLVVGFVSAYTSPALVSMTDR---NITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLI 461
            |:..|:.|::.|:.:...|.|.:.:.|.   |.|..||       :.||:.|..|.|.:..|...
plant    26 AIVASIISIIFGYDTGVMSGAQIFIRDDLKINDTQIEV-------LAGILNLCALVGSLTAGKTS 83

  Fly   462 EYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGT 526
            :.:|||.||..:||.|:|.|:|:....|..:::.||.:||..||.|.:..|||..|......||.
plant    84 DVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSASHRGF 148

  Fly   527 LGLLPTAFGNIGILLCFVA----GSF---MNWSMLAFLGAALPVPFLILMFLI---PETPRWFVG 581
            |..||....::||||.:|:    |..   :.|.::  ||.| ..|.|||.|.|   ||:|||.|.
plant   149 LTSLPELCISLGILLGYVSNYCFGKLTLKLGWRLM--LGIA-AFPSLILAFGITRMPESPRWLVM 210

  Fly   582 RGLEERARKALKWLRGKEADVEPELKGLMRSQADAD-------------RQASRNTMLELLKLNN 633
            :|..|.|:|.:..:...|.:.|...:.:: :.|:.|             :...::...||:    
plant   211 QGRLEEAKKIMVLVSNTEEEAEERFRDIL-TAAEVDVTEIKEVGGGVKKKNHGKSVWRELV---- 270

  Fly   634 LKP-------LSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGN--LCTIIVGIVNFLATFI 689
            :||       |..::|:.||:..:||.||:.|:.:|||.||......  |.|:.||:.......|
plant   271 IKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIII 335

  Fly   690 GIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGW---LPLTCFVIYILGFSLG 751
            ...|:|:.||:.||..|...||   |.|.......|.......|.|   |.:.....::..||:|
plant   336 ATFLLDKVGRRKLLLTSTGGMV---FALTSLAVSLTMVQRFGRLAWALSLSIVSTYAFVAFFSIG 397

  Fly   752 FGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLF 816
            .|||.|:...||.|.::|...||:..|.|......|:.:|..:|.|:...|.|::|..|.....:
plant   398 LGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFAGIAVAAWW 462

  Fly   817 FVIIYVPETQGKTLEDIERKMMG 839
            |....:|||:|..||::| |:.|
plant   463 FFFFMLPETKGLPLEEME-KLFG 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 143/470 (30%)
MFS 401..822 CDD:119392 136/458 (30%)
AT2G18480NP_179438.1 MFS_PLT 36..479 CDD:340995 140/460 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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