DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and PMT2

DIOPT Version :10

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_179210.1 Gene:PMT2 / 816110 AraportID:AT2G16130 Length:511 Species:Arabidopsis thaliana


Alignment Length:467 Identity:142/467 - (30%)
Similarity:216/467 - (46%) Gaps:42/467 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 ALSVSLGSLVVGF-VSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEY 463
            |:..|:.|:::|: :...:..|:....|..::..::     ..:.||:.:..|.|..|.|...::
plant    30 AILASMTSIILGYDIGVMSGAAIFIKDDLKLSDVQL-----EILMGILNIYSLIGSGAAGRTSDW 89

  Fly   464 LGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLG 528
            :|||.||:.....|...:||:..|.|...::.|||:||..||.|.:..|||..|......||.|.
plant    90 IGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPASSRGFLS 154

  Fly   529 LLPTAFGNIGILLCFVAGSF-------MNWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEE 586
            ..|..|.||||||.:|:..|       :.|..:..:||...|...|.:..:||:|||.|.:|...
plant   155 SFPEIFINIGILLGYVSNYFFAKLPEHIGWRFMLGIGAVPSVFLAIGVLAMPESPRWLVMQGRLG 219

  Fly   587 RARKALKWLRGKEADVEPELKGLMRSQADAD------------RQASRNTMLELLKLNNLKP--- 636
            .|.|.|......:.:....|..:.|:....|            :.|.:....:||    ::|   
plant   220 DAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLL----VRPTPS 280

  Fly   637 ----LSISLGLMFFQQFSGINAVIFYTVQIFKDAG--STIDGNLCTIIVGIVNFLATFIGIVLID 695
                |...||:.|.||.|||:||:.|:..||..||  |..|..|.|:.||:|..|...:|..|:|
plant   281 VRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVD 345

  Fly   696 RAGRKILLYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGW---LPLTCFVIYILGFSLGFGPIPW 757
            |.||:.||..|...|..:|..||.........|..: |.|   |.:|..:.::..||||.||:.|
plant   346 RFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQT-LKWAIGLAVTTVMTFVATFSLGAGPVTW 409

  Fly   758 LMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYV 822
            :...||.|.::|...||:....|...:.::..||..|:..:...|||.||..:......|...::
plant   410 VYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAVAAWVFFFTFL 474

  Fly   823 PETQGKTLEDIE 834
            |||:|..||:||
plant   475 PETRGVPLEEIE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 MFS_GLUT6_8_Class3_like 397..832 CDD:340916 139/463 (30%)
PMT2NP_179210.1 MFS_PLT 32..485 CDD:340995 139/462 (30%)

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