DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and PMT1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:466 Identity:143/466 - (30%)
Similarity:218/466 - (46%) Gaps:40/466 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 ALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYL 464
            |:..|:.|:::|:.....|.|.:.:.| ::...:|..:.   :.||:.:..|.|..|.|...::|
plant    30 AILASMTSIILGYDIGVMSGASIFIKD-DLKLSDVQLEI---LMGILNIYSLVGSGAAGRTSDWL 90

  Fly   465 GRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGL 529
            |||.||:.....|...:||:..|.|...::.|||:||..||.|.:..|||..|......||.|..
plant    91 GRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTS 155

  Fly   530 LPTAFGNIGILLCFVAGSF-------MNWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEER 587
            .|..|.||||||.:|:..|       :.|..:..:||...|...|.:..:||:|||.|.:|....
plant   156 FPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPSVFLAIGVLAMPESPRWLVLQGRLGD 220

  Fly   588 ARKALKWLRGKEADVEPELKGLMRSQADAD------------RQASRNTMLELLKLNNLKP---- 636
            |.|.|......:.:....|..:.|:....|            :.|.:....:||    ::|    
plant   221 AFKVLDKTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLL----VRPTPSV 281

  Fly   637 ---LSISLGLMFFQQFSGINAVIFYTVQIFKDAG--STIDGNLCTIIVGIVNFLATFIGIVLIDR 696
               |...||:.|.||.|||:||:.|:..||..||  |..|..|.|:.||:|..|...:|..::||
plant   282 RHILIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDR 346

  Fly   697 AGRKILLYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGW---LPLTCFVIYILGFSLGFGPIPWL 758
            .||:.||..|...|.|:|..||.........|..: |.|   |.:|..:.::..||:|.||:.|:
plant   347 FGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQT-LKWAIGLAVTTVMTFVATFSIGAGPVTWV 410

  Fly   759 MMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVP 823
            ...||.|.::|...||:....|...:.::..||..|:..:...|||.||..:......|...::|
plant   411 YCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFTFLP 475

  Fly   824 ETQGKTLEDIE 834
            ||:|..||::|
plant   476 ETRGIPLEEME 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 142/463 (31%)
MFS 401..822 CDD:119392 135/451 (30%)
PMT1NP_179209.1 Sugar_tr 29..489 CDD:278511 143/466 (31%)
MFS 31..473 CDD:119392 135/450 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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