DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and slc2a1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_001072458.1 Gene:slc2a1 / 779913 XenbaseID:XB-GENE-5755357 Length:492 Species:Xenopus tropicalis


Alignment Length:507 Identity:143/507 - (28%)
Similarity:235/507 - (46%) Gaps:87/507 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 VLAALSVSLGSL---------------VVGFVSA-----YTSP----ALVSMTDRNITSFEVTQD 437
            :||..:..:|||               :.||.:|     |..|    .|.|:...::..|.|   
 Frog    12 MLAVCTAVIGSLQFGYNTGVINAPQEVIEGFYNATWLERYNEPIPESTLTSLWSLSVAIFSV--- 73

  Fly   438 AGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIA---CAVNVAMVLCGRFL 499
                       .|:.|..:.|..:...||||::|...|...::::|:.   .||:..|::.|||:
 Frog    74 -----------GGMVGSFSVGLFVNRFGRRNSMLMANVLAFLAAILMGFSKLAVSFEMLIIGRFV 127

  Fly   500 AGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAG---SFMNWSMLAFLGAAL 561
            .|...|:.:..:|:|:||.....:||.||.|......:|||:..:.|   ...|.|:..||...:
 Frog   128 VGLYCGLTTGFVPMYVGEVSPTSLRGALGTLHQLGVVVGILIAQIFGLKPIMGNDSLWPFLLGCI 192

  Fly   562 PVPFL---ILMFLIPETPRW-FVGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQASR 622
            .:|.:   |::...||:||: .:.|..|::|:..||.||| ..||..:|    :...:..||..|
 Frog   193 FIPAILQCIMLPFCPESPRFLLINRNEEDKAKSVLKKLRG-TTDVSSDL----QEMKEESRQMMR 252

  Fly   623 N---TMLELLKLNNLK-PLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVN 683
            .   |:|||.:....: |:.|::.|...||.||||||.:|:..||:.| ........||..||||
 Frog   253 EKKVTILELFRSPLYRQPMFIAIILQLSQQLSGINAVFYYSTMIFQKA-QVEQPVYATIGAGIVN 316

  Fly   684 FLATFIGIVLIDRAGRKIL-------LYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGWLPLTCF 741
            ...|.:.:.:::||||:.|       :.|..|.|.:.|.:|          ..|..:.:|.:...
 Frog   317 TAFTVVSLFVVERAGRRTLHLIGLGGMAVCAILMTIALALL----------DSVGGMSYLSIVAI 371

  Fly   742 VIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWL 806
            ..::..|.:|.|||||.::.|:.....|.:|.:||...||...|:|...||.:....||: .|.:
 Frog   372 FGFVAFFEIGPGPIPWFIVAELFSQGPRPAAIAVAGLSNWTSNFIVGMGFQYVEQLCGAY-VFII 435

  Fly   807 FGAICFVGLFFVIIY--VPETQGKTLEDI-------ERKMMGRVRRMSSVAN 849
            |..:..:  |||..|  ||||:|:|.::|       |.:|:.:...::|:.:
 Frog   436 FTVLLLI--FFVFTYFKVPETKGRTFDEIASEFRQGEGQMVKQAEELNSLGH 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 139/482 (29%)
MFS 401..822 CDD:119392 131/467 (28%)
slc2a1NP_001072458.1 MFS_GLUT_Class1 13..457 CDD:340989 137/476 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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