DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-1 and slc2a11b

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:XP_005165088.1 Gene:slc2a11b / 564970 ZFINID:ZDB-GENE-070705-96 Length:522 Species:Danio rerio


Alignment Length:550 Identity:129/550 - (23%)
Similarity:228/550 - (41%) Gaps:93/550 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 EMDNKRGENIRHAVPFVRQITEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVGF-VSAYT 417
            :|..:.|| .:...|.:|...|   |..::..|:.   |:...|.|| .:. |:...|: :|...
Zfish    11 KMGKENGE-FKEYEPLLRDFRE---PVHQIKVPSK---YLLLAVWAA-GIG-GTFQYGYNISIIN 66

  Fly   418 SPA-----LVSMTDRNITSFEVTQD----AGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILAT 473
            :|.     .::.|.....|.|::.|    ..|.:..|..:.||.|...||.|....||:.|:|..
Zfish    67 APTKAVQNFINQTWTERYSTEISSDMLTLLWSIIVSIFTIGGLVGASVGGTLAIRFGRKGTLLFN 131

  Fly   474 AVPFIVSSLLIAC---AVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFG 535
            ....::::|.:..   |....:::.||||.|...|||....|:|:||.....:||.:.:..:.|.
Zfish   132 NTFALLAALFMGLSYPASTFELLVIGRFLTGVNAGIAICVQPLYIGEIAPRALRGAMAMGTSIFI 196

  Fly   536 NIGIL------LCFVAGSFMNWSMLAFLGAALPVPFLILMFLI---PETPRW-FVGRGLEERARK 590
            ..|||      |..:.|....|.:|.   :.:.:|.::.:..:   ||:||: .:.||.:...:|
Zfish   197 TGGILTGQVMGLKELLGKDEYWPILL---STICIPAVLQLLTLPWFPESPRYLLIDRGDDIACQK 258

  Fly   591 ALKWLRGKEADVEPELKGLMRSQADA---------DRQASRNTMLELLKLNNLKPLSISLGLMFF 646
            ||.|..|:: ....|::.:.|.:..|         :....|:...:||.|         :.:...
Zfish   259 ALMWFHGQD-KYHGEMEDIERERVSALGIKPKKPWELFTDRSIRWQLLTL---------VVIHTS 313

  Fly   647 QQFSGINAVIFYTVQIFKDAG--------STIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILL 703
            ||.:||||:.||...:|..||        :|:....|..|..:...|       ||:..||:.| 
Zfish   314 QQLNGINAIYFYADYVFTQAGIPDDKIPYATVGTGACECITALTCGL-------LIESLGRRAL- 370

  Fly   704 YVSDIAMVLTLFVLGG----------FFYCKTYGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWL 758
                        ::||          |....|:......:.:|.:.|.:.:||.|.||.|.:..:
Zfish   371 ------------IIGGYTLMSVCCICFTIALTFQDSSPWVPYLSMVCVLAFILSFGLGPGGVTNI 423

  Fly   759 MMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVP 823
            :..|:.....|.:|..:..:.||...||:...|..:...:..: .|.:|..||.:...::...||
Zfish   424 LTTELFTQTDRPAAYMIGGSINWTSFFVIGMIFPFIVNGLKQY-CFLVFLVICLLVATYIFFVVP 487

  Fly   824 ETQGKTLEDIERKMMGRVRRMSSVANIKPL 853
            ||:.||..:|:.:...|.:.:::.....||
Zfish   488 ETKNKTFLEIQNEFKSRKKIINANGTEGPL 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 118/500 (24%)
MFS 401..822 CDD:119392 107/470 (23%)
slc2a11bXP_005165088.1 Sugar_tr 54..501 CDD:278511 114/480 (24%)
MFS 98..486 CDD:119392 99/421 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577219
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.