DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-1 and slc2a1a

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_001034897.1 Gene:slc2a1a / 555778 ZFINID:ZDB-GENE-030131-3158 Length:488 Species:Danio rerio


Alignment Length:488 Identity:136/488 - (27%)
Similarity:230/488 - (47%) Gaps:81/488 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 QVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSF--EVTQDAGS-----------W------ 441
            :|...|.:::|:.|:|.:....:..:::...:.|..|  |...:..|           |      
Zfish     7 EVTPQLMMAVGTAVIGSLQFGYNTGVINAPQKIIEGFYNETWHNRYSEYIPPTTLTTLWSVSVAI 71

  Fly   442 --VGGIMPLAGLAGGIAGGPLIEYLGRRNTIL-ATAVPFIVSSLL--IACAVNVAMVLCGRFLAG 501
              ||||:      |..:.|..:...||||::| |..:.||.::.:  ...|.:..|::.|||:.|
Zfish    72 FSVGGIL------GSFSVGLFVNRFGRRNSMLIANILAFIAAAFMGFSKLAESWEMLIIGRFIVG 130

  Fly   502 FCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAGSFMNWSMLAFLGAALPVPFL 566
            ...|:::..:|:|:||.....:||.||.|......||||:..:.|      :...:|:....||:
Zfish   131 LYSGLSTGFVPMYVGEIAPTSLRGALGTLHQLGIVIGILMAQIFG------IKEIMGSPTLWPFM 189

  Fly   567 I------------LMFLIPETPRW-FVGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADR 618
            :            |:...||:||: .:.:..|.:|:..||.|||.: ||..:    |:...|..|
Zfish   190 LGFTFIPAVLQCALLPFCPESPRYLLINQNEEAKAKSVLKKLRGTD-DVGAD----MQEMRDESR 249

  Fly   619 QASRN---TMLELLKLNNLK-PLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIV 679
            |..|.   |:.||.:.:..: |:.|::.|...|||||||||.:|:..||:.||.: :....||..
Zfish   250 QMMREKTVTIPELFRSSLYRQPIFIAIMLQLSQQFSGINAVFYYSTGIFEKAGVS-EPVYATIGA 313

  Fly   680 GIVNFLATFIGIVLIDRAGRKIL-------LYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGWLP 737
            |.||...|.:.:.:::|.||:.|       :.||.:.|.:.:.:|          ..|..:.::.
Zfish   314 GAVNTAFTVVSLFIVERVGRRSLHLVGLMGMAVSSVLMTIAMALL----------TKVEWMSYVS 368

  Fly   738 LTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHG 802
            :.....::..|.:|.|||||.::.|:.....|.||.:||...|||..|:|...||.:....|.: 
Zfish   369 IVAIFSFVAFFEIGPGPIPWFIVAELFSQGPRPSAFAVAGFSNWFANFLVGMCFQYVEELTGPY- 432

  Fly   803 AFWLFGAICFVGLFFVIIY--VPETQGKTLEDI 833
            .|.:|..:..:  |||..|  ||||:|::.|:|
Zfish   433 VFIIFTVLLLI--FFVFTYFKVPETKGRSFEEI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 135/486 (28%)
MFS 401..822 CDD:119392 128/470 (27%)
slc2a1aNP_001034897.1 Sugar_tr 18..467 CDD:278511 133/477 (28%)
MFS 62..450 CDD:119392 119/418 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577173
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2166
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.770

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