DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-1 and sut3

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_524731.1 Gene:sut3 / 44268 FlyBaseID:FBgn0028561 Length:476 Species:Drosophila melanogaster


Alignment Length:485 Identity:129/485 - (26%)
Similarity:221/485 - (45%) Gaps:66/485 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 WT--QVLAALSVSLGSLV-VG-----------FVSAYTSPALVSMTDRNITSFEVTQDAGSWVGG 444
            ||  .||..:.:::|::: ||           |:.::...:::......:...::|....:.|. 
  Fly     8 WTCLLVLICVCITVGTVIPVGYAFGVMNAPSAFIRSWIMESVLERYSSRLGDSQMTIIMSTVVS- 71

  Fly   445 IMPLAGLAGGIAGGPLIEY----LGRRNTILATAVPFIVS---SLLIACAVNVAMVLCGRFLAGF 502
                ..|.||:.|.|....    ||||..:..:.:..:||   .|....|.::.|:|.||.:.|.
  Fly    72 ----IFLIGGMLGAPFAPIFSARLGRRGILTLSGLLLLVSCICQLFCRMANSIEMLLLGRLIGGL 132

  Fly   503 CVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAGSFMNWSML---------AFLG 558
            ...:...:.|:||.|....|:.|::|:    |..||:....|.|...::..|         |..|
  Fly   133 AAALIYATQPMYLVELAPAELSGSVGV----FTCIGLTGGIVLGQVFSFDFLLGTEKLWPYALSG 193

  Fly   559 AALPVPFLIL----MFLIPETPRWFVGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQ 619
            :|:   |:::    :|..||:||:.:.:|..|:||..|..||..|..|..|:.....|..|    
  Fly   194 SAI---FVLIGLAPIFWFPESPRFLMSQGRREKARVTLMRLRRDEGRVNAEMAEFEVSSTD---- 251

  Fly   620 ASRNTMLELLKLNNLK-PLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNL-CTIIVGIV 682
            ..:.||.::|..:.|| ||.|.....|.||.|||:|:.||:::||..:|.|....: ....:|::
  Fly   252 EGQVTMKQVLCNSKLKLPLFIVCSFHFVQQMSGISAIWFYSIEIFTQSGFTAAVAMWLNFALGLL 316

  Fly   683 NFLATFIGIVLIDRAGRKILLYVSDI--AMVLTLFVLGGFFYCKTYGPDVSHLGWLPLTCFV--- 742
            ||::..:|..|:....|::::.:|.:  |:.|.|.|:|...        :|.:.....||..   
  Fly   317 NFISALMGPWLMRSFNRRLMMTISCLCSAIFLVLLVVGLEL--------MSTIHEFSFTCIAFLS 373

  Fly   743 IYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLF 807
            :||:.|::|.||.|:.:..||.....|.||.::.:.|||...||:...|..|..|.|.. .|.|.
  Fly   374 LYIITFNMGLGPTPYFIGSEIFETASRPSAMALGSFFNWLANFVLNMIFPTLNSATGPF-VFLLC 437

  Fly   808 GAICFVGLFFVIIYVPETQGKTLEDIERKM 837
            ...|..|......|:|||:.:..:|:.:.|
  Fly   438 VVFCAYGFLLTYRYLPETRNRDAKDVAQLM 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 127/479 (27%)
MFS 401..822 CDD:119392 119/459 (26%)
sut3NP_524731.1 Sugar_tr 28..466 CDD:278511 122/462 (26%)
MFS 66..451 CDD:119392 114/409 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444592
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.