DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and CG10960

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster


Alignment Length:522 Identity:196/522 - (37%)
Similarity:290/522 - (55%) Gaps:23/522 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 QQQRSISTDSRKSRRLYEMDEMDNKRGENIRHAVPFVRQITEDGKPKLE-----------VYRPT 387
            :..:...:::.:|..|.|..|...|.|.  |..|..|: .:::|:....           |:..|
  Fly    13 EANKKSGSNNEESSHLLESAENGAKYGS--RQPVKIVK-ASDNGRTSSTPHDQENLLGNMVHTST 74

  Fly   388 TNPIYIWTQVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNI-TSFEVTQDAGSWVGGIMPLAGL 451
            :|....|.|.:|||:.:.|:...|.|..:||||...:.||.. ..|.|.:|..||||..|.|...
  Fly    75 SNNSQKWPQYVAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAA 139

  Fly   452 AGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLG 516
            ...|..|.||..:||:.|:|...:|||:...::..||||:|:...||:.|...|...::.|:|.|
  Fly   140 CVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTG 204

  Fly   517 ETVQPEVRGTLGLLPTAFGNIGILLCFVAGSFMNWSMLAFLGAALPVPFLILMFLIPETPRWFVG 581
            |..|.|:|||||........||||..:..|:.:....|:.:...||:.|..:.|.:||:|.:.|.
  Fly   205 EIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVKIFWLSIICGILPLIFGAIFFFMPESPTYLVS 269

  Fly   582 RGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLKLN---NLKPLSISLGL 643
            :...|.|.|:::||||||.|.||||..|    .:.||:...|.:.....||   ..|.|:||:||
  Fly   270 KDRSENAIKSIQWLRGKEYDYEPELAEL----RETDRETKANKVNVWAALNRPVTRKALAISMGL 330

  Fly   644 MFFQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDI 708
            |||||..||||||||..:||.:|.:.|:....||::||:..:|||:..:::|:.||:|||..|.|
  Fly   331 MFFQQVCGINAVIFYASRIFLEANTGIEAEWATILIGIMQVVATFVSTLVVDKLGRRILLLASGI 395

  Fly   709 AMVLTLFVLGGFFYC-KTYGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSA 772
            :|.::...:|.:|:. |.....|..|||||:....::|:.||:|:||:|||||||:....|:|.|
  Fly   396 SMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFA 460

  Fly   773 ASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIERKM 837
            .|:|...||...|||||||.:|...:|..|.||||..:..||:.||...||||:||:|.:|::::
  Fly   461 GSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQEL 525

  Fly   838 MG 839
            .|
  Fly   526 AG 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 184/466 (39%)
MFS 401..822 CDD:119392 170/425 (40%)
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 142/360 (39%)
MFS 118..508 CDD:119392 160/393 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444321
Domainoid 1 1.000 212 1.000 Domainoid score I87
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 237 1.000 Inparanoid score I2130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm8886
orthoMCL 1 0.900 - - OOG6_100060
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
1110.800

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