DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-1 and CG4797

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_726368.2 Gene:CG4797 / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster


Alignment Length:558 Identity:161/558 - (28%)
Similarity:255/558 - (45%) Gaps:64/558 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 ESDEDFLTSRQH-----------FQQQRSISTDSRKSRRLYEMDEMD----NKRGENIRHAVPFV 370
            |.|:::|....|           ||.:::    |..||:|..:||.|    |:||  :.|     
  Fly     4 ERDDEYLKFVPHTMSYQVVPGSEFQCKKA----SYSSRKLSTIDEQDDDAANRRG--MMH----- 57

  Fly   371 RQITEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVT 435
                                     |:||..:|.|.|...|....:::..|..:.|.|.|...:.
  Fly    58 -------------------------QILATCAVLLLSAGCGMPIGFSAILLPQLMDNNSTEIPID 97

  Fly   436 QDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLA 500
            .:.|||:..:..||...|.:..|||.:|||||.|::.:.:|.::....:|.|.::.:|:..|||.
  Fly    98 VETGSWIASVHSLATPFGSLLSGPLADYLGRRRTLILSVIPLLLGWSTLAIAKSIKVVIFARFLC 162

  Fly   501 GFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAGSFMNWSMLAFLGAALPVPF 565
            ||..||......||:.||.:|.:|..|...|....:.|||:.:..||.|.|..:|:....||:..
  Fly   163 GFATGILGGPGQVYIAETAEPNLRSLLIGAPYVAYSSGILMVYSLGSMMYWRSVAWCANVLPLLS 227

  Fly   566 LILMFLIPETPRWFVGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLK 630
            ::.:..|||||.|.:..|.|:||.:||.:|||.|...:.||..:  .|..|..:.:..|...:.:
  Fly   228 MVSISFIPETPAWLLRNGHEKRALQALSFLRGSEISAQKELNDM--KQRLAKERVTTKTNENIFQ 290

  Fly   631 L----NNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGI 691
            |    ..:|||.|.:.....|.|||...||||.|.:..:.|:..|.....|...:|..:...:..
  Fly   291 LCCQRVAIKPLVIVIVFSLLQMFSGTFIVIFYAVDMISEFGAEFDSKQAAIATAVVRVICCMVFC 355

  Fly   692 VLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGWLPLTCFVIYILGFSLGFGPIP 756
            |::....|:.::.||.|...|...||..:.|.:...|.:|:..::...|.:.||: |:.....:|
  Fly   356 VVLIFVRRRRIMIVSGIGSGLFCLVLSVYQYARFDQPKMSYDVFVGAGCLLGYII-FNTALMVMP 419

  Fly   757 WLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIY 821
            .:|:||:.||:|||..|....|......|:..|.|..|...:...|.|.:||...|:...|:.::
  Fly   420 GIMIGELFPARIRGRTAGGVFASMNVALFIFAKKFPALQAMLKMRGVFLVFGVSSFLLTAFMCLF 484

  Fly   822 VPETQGKTLEDIERKMMG------RVRRMSSVANIKPL 853
            .|||:|::||.||....|      |..|.....|::||
  Fly   485 QPETKGRSLEHIEDYFNGDNWLWFRRDRGYKTVNLQPL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 136/454 (30%)
MFS 401..822 CDD:119392 127/424 (30%)
CG4797NP_726368.2 MFS 64..484 CDD:119392 127/422 (30%)
Sugar_tr 89..497 CDD:278511 127/410 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 166 1.000 Domainoid score I806
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I956
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.970

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