DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and CG4607

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster


Alignment Length:534 Identity:150/534 - (28%)
Similarity:252/534 - (47%) Gaps:52/534 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 RGENIRHAVP--------FVRQITED--------GKPKLEVYRPTTNPIYIWTQVLAALSVSLGS 407
            :|:.....||        ..:..|:|        |:.:|.|.|          |.|.....:.|.
  Fly     2 KGQQEEQLVPPPAYKPTVVAKDTTKDSHAKEKPLGEGRLAVLR----------QELMVFLGNSGV 56

  Fly   408 LVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILA 472
            |..|.|.:..:..|..:.|.. ..|.:.:|..||...|..:|...||:.....::.:||::|||.
  Fly    57 LGSGMVVSMPAVTLNQLHDET-QPFWLNKDESSWFASIQNMACPLGGLLVSYFLDRIGRKHTILL 120

  Fly   473 TAVPFIVSSLLIACA-------VNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLL 530
            |.:..::..:|:..:       :....:|.||...|..:|:....:.||..|...|::||.| :|
  Fly   121 TNLIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVGVYSAEISLPKIRGRL-IL 184

  Fly   531 PTAFG-NIGILLCFVAGSFM--NWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKAL 592
            .|:.| ..||||.:..|.|:  |..::..:.....:...:|:|.:||:|.|.:.||.||||||:|
  Fly   185 GTSLGLASGILLMYCLGYFIRHNIQLIFGISCCYQLAATLLVFPMPESPSWLLTRGKEERARKSL 249

  Fly   593 KWLRG---KEADVEPELK---GLMRSQADADRQASRNTMLELL--KLNNLKPLSISLGLMFFQQF 649
            ::.||   ||.|..||.:   ..|:..|||....:....|..:  :....||:.:......|||.
  Fly   250 RYFRGLPKKEVDYVPEFEAELAHMKELADASNTTAAGESLSQMIHRPEVYKPVLMMTTFFGFQQA 314

  Fly   650 SGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAM-VLT 713
            .|:..:|.|.|||.:.||.|||..|..:::|:...:.|.....:.::.|||.....|...| ...
  Fly   315 CGVVVIIVYAVQIAQQAGVTIDPVLVAVMLGVARIITTLFMSGIFEKWGRKPSGIFSATGMGACM 379

  Fly   714 LFVLGGFFYCKTYGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATA 778
            |.:.||.::..|.|.    |.|||:.|.|.:|:..::|...:|:.|:.|:.|.:.||||:.:|..
  Fly   380 LLLAGGNWFPDTLGT----LHWLPVACIVAHIVFSTMGMLTLPFFMISEVFPQRARGSASGIAIF 440

  Fly   779 FNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDI-ERKMMGRVR 842
            |.....|::.|.:.::..|:|....|..:..|.|:...|:.::||||:|:|||:: ||...|:..
  Fly   441 FGMILAFIMLKIYPNMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELEERWQTGKFS 505

  Fly   843 RMSSVANIKPLSFN 856
            |..::.|:|.:..:
  Fly   506 RRLTIVNLKDVELH 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 137/469 (29%)
MFS 401..822 CDD:119392 125/439 (28%)
CG4607NP_572380.1 MFS 55..484 CDD:119392 125/434 (29%)
SP 67..495 CDD:273317 129/433 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444599
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4448
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

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